Alternatives and similar repositories for GWENA:

Users that are interested in GWENA are comparing it to the libraries listed below

• andreasmock / MetaboDiff
  ☆30Updated 4 years ago
• djhn75 / RNAEditor
  ☆14Updated 2 years ago
• YuLab-SMU / MMINP
  Microbe-Metabolite INteractions-based metabolic profiles Predictor
  ☆13Updated last year
• lcalviell / ORFquant
  An R package for Splice-aware quantification of translation using Ribo-seq data
  ☆18Updated last year
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated 2 weeks ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆22Updated last month
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 3 years ago
• yyoshiaki / VIRTUS2
  A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
  ☆18Updated last year
• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆31Updated last year
• nasqar / NASQAR
  NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
  ☆32Updated 4 years ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆34Updated 6 months ago
• gregpoore / tcga_rebuttal
  Re-analysis of data provided by Gihawi et al. 2023 bioRxiv
  ☆25Updated last year
• UCLouvain-CBIO / WSBIM2122
  Omics data analysis
  ☆14Updated last month
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 5 years ago
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆38Updated 2 years ago
• IrinaVKuznetsova / CirGO
  ☆21Updated 7 months ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆38Updated 2 years ago
• ohlerlab / RiboseQC
  Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
  ☆17Updated last year
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆24Updated 9 months ago
• genemine / iread
  iread
  ☆23Updated 3 years ago
• YuLab-SMU / MicrobiomeProfiler
  A shiny package for microbiome functional enrichment analysis
  ☆37Updated 2 months ago
• TRON-Bioinformatics / splice2neo
  R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes
  ☆13Updated 2 months ago
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆16Updated 2 months ago
• jokergoo / KeywordsEnrichment
  ☆32Updated last year
• NBISweden / workshop-mlbiostatistics
  ☆15Updated 3 months ago
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆32Updated 4 years ago
• jsh58 / DMRfinder
  Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
  ☆27Updated last year
• gtonkinhill / TCGA_analysis
  ☆27Updated last year
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 5 years ago