zhilizheng / qsubshcom

Related projects: ⓘ

• schmitzlab / Widespread-Long-range-Cis-Regulatory-Elements-in-the-Maize-Genome
  scripts used for processing and analyzing data in the article.
  ☆13Updated 4 years ago
• yukaiquan / biotools
  I often use some of the self-written programs.
  ☆13Updated 5 months ago
• LappalainenLab / lorals_paper_code
  ☆23Updated 2 years ago
• Shuhua-Group / CPC-graph-based-NGS-pipeline
  A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data
  ☆13Updated last year
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆17Updated last year
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆21Updated last year
• mortazavilab / cerberus
  ☆14Updated last month
• sunyumail93 / PipeRNAseq
  A comprehensive pipeline for RNAseq data analysis
  ☆22Updated 3 weeks ago
• kernco / functional-annotation
  Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
  ☆22Updated 2 years ago
• zhaoshuoxp / lncRNA
  De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
  ☆10Updated last year
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆19Updated 6 years ago
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆11Updated last month
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆24Updated last month
• lulab / shared_scripts
  shared scripts in Lu Lab @ Tsinghua University
  ☆11Updated 5 years ago
• ChenFengling / HiCpipe
  an efficient Hi-C data processing pipeline
  ☆15Updated 5 months ago
• Jwindler / Assembly_tools
  A collection of tools for Genome Assembly analysis
  ☆17Updated 3 months ago
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 4 years ago
• darencard / GenomeAnnotation
  Various scripts that I have created that are useful for genome annotation (repeats & proteins)
  ☆15Updated 2 years ago
• hanlinqian / IntegrativeNetworkMap
  ☆22Updated last year
• yiliao1022 / Pepper3Dgenome
  ☆14Updated 2 years ago
• mccoy-lab / MAGE
  Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…
  ☆29Updated 2 months ago
• naumenko-sa / bioscripts
  a bucket of bioinformatics scripts
  ☆13Updated 11 months ago
• LewisLabUCSD / NGS-Pipeline
  All kinds of NGS analysis pipeline
  ☆12Updated 4 years ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆32Updated 3 weeks ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆21Updated last month
• zhaoshuoxp / Pipelines-Wrappers
  Shell wrappers for common NGS pipelines, RNAseq, ChIPseq, ATACseq, CUT&RUN/TAG, WGS, etc.
  ☆13Updated last week
• YinYuan-001 / muntjac_code
  ☆10Updated 2 years ago
• dxsbiocc / Workflow
  The snakemake analysis workflow for bioinformatics
  ☆22Updated 3 months ago
• deLaatLab / pipe4C
  4C-seq processing pipeline
  ☆22Updated 5 months ago
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆13Updated last year