☆12Apr 21, 2016Updated 10 years ago
Alternatives and similar repositories for metaCRISPR
Users that are interested in metaCRISPR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The CRISPR assembler☆35May 13, 2021Updated 5 years ago
- MetaCRAST: reference-guided CRISPR detection in metagenomes☆14Mar 10, 2020Updated 6 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- Mining CRISPRs in Environmental Datasets☆125Feb 10, 2023Updated 3 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Aug 18, 2017Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- EnsembleAssembler performs de novo assembly of pathogen genomes from metagenomic samples sequenced using Illumina platforms☆10Nov 30, 2014Updated 11 years ago
- ☆119Mar 9, 2016Updated 10 years ago
- A CRISPR repeat|spacer analysis tool☆20May 7, 2021Updated 5 years ago
- ☆11Apr 11, 2017Updated 9 years ago
- simple and not slow ORF caller☆23Apr 7, 2026Updated last month
- A pipeline for construction and graphical visualization of annotated pangenome networks.☆16Oct 24, 2018Updated 7 years ago
- ☆20Jan 12, 2017Updated 9 years ago
- Convert QIIME files into Oligotyping subsets.☆15Dec 10, 2014Updated 11 years ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆80Jun 14, 2016Updated 9 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Scripts required to calculate tetramer frequencies and create input files for ESOM. See: Dick, G.J., A. Andersson, B.J. Baker, S.S. Simmo…☆17Feb 17, 2022Updated 4 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- Self-exploratory Streamlit app to know more about palmer penguins.☆11Jun 26, 2023Updated 2 years ago
- A package to manage R-like data frames written in Go.☆20Dec 30, 2013Updated 12 years ago
- A package code for fitting power law distributions using Bayesian or Maximum Likelihood approaches.☆12Aug 1, 2019Updated 6 years ago
- ☆33Dec 28, 2024Updated last year
- Subgraph for Curve.fi☆10Mar 20, 2021Updated 5 years ago
- CRISPR discovery pipeline☆33Nov 2, 2018Updated 7 years ago
- Source code of the VirSorter tool, also available as an App on CyVerse/iVirus (https://de.iplantcollaborative.org/de/)☆101Oct 3, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- viralComplete: BLAST-based viral completeness verification☆23Oct 4, 2021Updated 4 years ago
- Pipeline for Evaluating Prokaryotic References☆11Sep 16, 2016Updated 9 years ago
- Unofficial python bindings for the Tobii EyeX C/C++ API.☆12Jan 22, 2016Updated 10 years ago
- My personal Visual Studio Code settings☆12Sep 3, 2020Updated 5 years ago
- Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, bi…☆13Dec 21, 2017Updated 8 years ago
- A collection of functions compatible with the Opentrons API☆10Oct 28, 2022Updated 3 years ago
- python scripts for proteogenomics analysis☆10Oct 17, 2019Updated 6 years ago
- VSC user training material and documentation☆10May 20, 2026Updated last week
- Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.☆14Sep 16, 2020Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆26Oct 15, 2020Updated 5 years ago
- Software for predicting translation initiation rates in bacteria☆33Jul 30, 2025Updated 9 months ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆14Oct 19, 2023Updated 2 years ago
- ☆25Feb 21, 2017Updated 9 years ago
- ☆13Aug 15, 2025Updated 9 months ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 7 years ago