Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"
☆13Jan 24, 2022Updated 4 years ago
Alternatives and similar repositories for ToxIBTL
Users that are interested in ToxIBTL are comparing it to the libraries listed below
Sorting:
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- ☆24Feb 20, 2025Updated last year
- ☆17Dec 13, 2020Updated 5 years ago
- Deep Binding Structure RMSD Prediction☆22Mar 19, 2021Updated 5 years ago
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆26May 29, 2025Updated 9 months ago
- Generative models of chemical data for PaccMann^RL☆13Jun 2, 2023Updated 2 years ago
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated last month
- ☆14Jul 12, 2021Updated 4 years ago
- HemoPI2: Prediction of hemolytic activity of peptides against mammalian RBCs☆13Feb 10, 2025Updated last year
- High-throughput framework for running molecular simulations for METL☆22Sep 18, 2025Updated 6 months ago
- predicting peptide-protein interactions☆139Dec 23, 2023Updated 2 years ago
- Anticancer Peptide Identification employing Multi-headed Deep-CNN☆13Nov 18, 2021Updated 4 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- A collection of transformer-based models and developmental scripts presented in the publication "Transformers enable accurate prediction …☆16Oct 3, 2025Updated 5 months ago
- ☆14Jul 14, 2023Updated 2 years ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21May 16, 2022Updated 3 years ago
- Web cards/apps describing peptides☆30Apr 26, 2023Updated 2 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆57Nov 26, 2024Updated last year
- VirusScan Pipeline☆12Feb 7, 2026Updated last month
- ☆18Nov 24, 2019Updated 6 years ago
- Deep learning tools for peptide substrate prediction and generation☆41Nov 20, 2025Updated 4 months ago
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆43Mar 5, 2026Updated 2 weeks ago
- ☆14Jul 5, 2022Updated 3 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Apr 19, 2024Updated last year
- ☆25Aug 12, 2025Updated 7 months ago
- Code for the paper "Exploiting Pretrained Biochemical Language Models for Targeted Drug Design", to appear in Bioinformatics, Proceedings…☆17Feb 26, 2024Updated 2 years ago
- ☆14Dec 14, 2023Updated 2 years ago
- ☆15Jul 15, 2020Updated 5 years ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆41Aug 1, 2025Updated 7 months ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 6 years ago
- ☆50Aug 13, 2025Updated 7 months ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆28Jan 8, 2024Updated 2 years ago
- ☆17Mar 11, 2023Updated 3 years ago
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- ☆14Jul 6, 2023Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 10 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆19Oct 31, 2025Updated 4 months ago