WLYLab / ToxIBTLLinks
Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"
☆13Updated 3 years ago
Alternatives and similar repositories for ToxIBTL
Users that are interested in ToxIBTL are comparing it to the libraries listed below
Sorting:
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆18Updated 5 months ago
- KDS software for Kinase Drug Selectivity☆11Updated 2 years ago
- Geometry-aware protein binding site predictor☆25Updated last year
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Updated 3 years ago
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Updated 9 months ago
- Sequence-based protein solubility predictor☆11Updated 5 years ago
- MEGADOCK on Google Colaboratory☆19Updated 2 years ago
- Long disorder consensus predictor☆17Updated 2 months ago
- ☆10Updated 6 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- ☆23Updated 2 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- Prediction of Protein-Small molecule binding affinities☆18Updated last month
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 4 years ago
- Peptide library design☆23Updated 5 years ago
- Source code for the BUDE Alanine Scan web application.☆12Updated 5 months ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 9 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 11 months ago
- ☆11Updated 5 years ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆28Updated last month
- EvolveX, a de novo antibody computational design pipeline.☆12Updated last month
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated last year
- Pipeline for protein-protein interaction prediction☆26Updated 3 years ago
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 2 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 2 months ago
- webserver☆23Updated 5 months ago
- Sequence-based protein solubility prediction using multidimensional embedding☆12Updated 4 years ago