BlueBrain / atlas-alignment
Blue Brain multi-modal registration and alignment toolbox
☆11Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for atlas-alignment
- 2D image registration in python, using napari.☆16Updated 2 years ago
- Standalone cellfinder cell detection algorithm☆19Updated 10 months ago
- Loading and saving of image data.☆10Updated 9 months ago
- Process images using SimpleITK in napari☆19Updated 3 weeks ago
- Get Your Brain Together Neuroimage Registration Workshops and Hackathons☆20Updated 3 months ago
- Segmentation of anatomical structures in a common coordinate space☆28Updated this week
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆11Updated 3 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated 11 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated 11 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆51Updated last year
- MorphoFeatures code and data☆18Updated last year
- A self-supervised denoising algorithm.☆24Updated 7 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- python tools for BigDataViewer☆21Updated last year
- Script that registers Histology slices to volumetric image data☆11Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆11Updated 2 weeks ago
- Visualise brainreg registration output☆10Updated 2 years ago
- MultiModal Big Image Data Sharing and Exploration☆12Updated last year
- ☆20Updated 3 months ago
- Efficient cell detection in large images using cellfinder in napari☆24Updated 10 months ago
- ☆27Updated 3 weeks ago
- Scalable Optical Flow-based Image Montaging and Alignment☆54Updated this week
- Block-wise task scheduling for large nD volumes.☆27Updated last week
- ☆13Updated 2 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆44Updated this week
- OME-TIFF IO in python☆19Updated 2 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆49Updated 2 months ago