Alternatives and similar repositories for Slice2Volume

Users that are interested in Slice2Volume are comparing it to the libraries listed below

• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆38Updated 11 months ago
• GuillaumeMougeot / biom3d
  Easy Volumetric Segmentation with Deep Learning
  ☆26Updated this week
• vessap / vessap
  Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
  ☆70Updated 3 years ago
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆47Updated 11 months ago
• embl-cba / elastix-wrapper
  ☆13Updated 3 months ago
• tpecot / DeepLearningBasedSegmentationForBiologists
  3-day workshop to teach biologists how to train and process deep convolutional neural networks for image segmentation through a comprehen…
  ☆12Updated 2 years ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• stegmaierj / Cellpose3D
  3D Extension of the Cellpose Algorithm by Stringer et al., 2021.
  ☆36Updated 2 years ago
• OSchoppe / AIMOS
  AI-enabled Mouse Organ Segmentation
  ☆13Updated 4 years ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆53Updated 11 months ago
• natalie11 / tUbeNet
  CNN for segmenting vasculature
  ☆13Updated last year
• peterhpark / neuroclear
  Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…
  ☆29Updated last month
• AICONSlab / MIRACL
  Multi-modal Image Registration And Connectivity anaLysis
  ☆43Updated this week
• brainglobe / slicereg
  A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.
  ☆37Updated last year
• RENCI / Segmentor
  3D segmention tool
  ☆13Updated 2 years ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆21Updated 2 weeks ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆21Updated 2 years ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 3 months ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆54Updated last month
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆72Updated this week
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• NicoKiaru / ABBA-Python
  How to use Aligning Big Brains and Atlases with Python
  ☆15Updated 2 years ago
• clij / clupath
  GPU-accelerated image processing in QuPath
  ☆15Updated 3 years ago
• danionella / warpfield
  GPU-based 3D non-rigid volumetric registration
  ☆27Updated this week
• nadavyayon / Intensify3D
  Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…
  ☆19Updated 4 years ago
• ntustison / ANTsXMouseBrainMapping
  The ANTsX Ecosystem for Mapping the Mouse Brain
  ☆11Updated last month
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 5 months ago
• MIDA-group / inspire
  INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
  ☆12Updated 3 years ago
• wershofe / TWOMBLI
  ☆11Updated last year
• raacampbell / matlab_elastix
  MATLAB Elastix wrapper
  ☆27Updated 11 months ago