imagej / napari-imagejLinks
Use ImageJ functionality from napari
☆32Updated 3 months ago
Alternatives and similar repositories for napari-imagej
Users that are interested in napari-imagej are comparing it to the libraries listed below
Sorting:
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆99Updated last week
- python tools for BigDataViewer☆22Updated last year
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- ☆13Updated last year
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- Linking napari layers with Matplotlib plots☆42Updated 3 weeks ago
- A 3D interactivity toolbox for napari☆37Updated 5 months ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆18Updated 2 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last month
- Process images using SimpleITK in napari☆23Updated 7 months ago
- ImageJ convenience layer for N5☆19Updated last month
- A napari plugin for zarr backed OME-NGFF images☆42Updated 2 weeks ago
- 1d plotting in napari-based canvas.☆25Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- ☆51Updated 7 months ago
- ☆33Updated 7 months ago
- Cookiecutter for napari plugins☆71Updated last year
- A napari plugin to view and edit metadata☆12Updated 2 years ago
- ☆12Updated 3 months ago
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- ☆49Updated 2 weeks ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆87Updated 2 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 5 months ago
- StarDist plugin for napari☆38Updated last year
- ☆22Updated 2 years ago