grailbio-publications / Jamshidi_CCGA1LOD_2022Links
☆10Updated 3 years ago
Alternatives and similar repositories for Jamshidi_CCGA1LOD_2022
Users that are interested in Jamshidi_CCGA1LOD_2022 are comparing it to the libraries listed below
Sorting:
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- ☆19Updated 7 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- ☆16Updated 2 years ago
- Fast method for inferring cancer clonal population structure from SNV data.☆66Updated last week
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Updated 4 years ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 6 years ago
- Collection of fragmentomic analysis scripts☆12Updated last year
- ☆40Updated 6 months ago
- ☆38Updated 5 years ago
- cnv-seq with custom bugfix☆10Updated 12 years ago
- ☆25Updated 3 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆28Updated 2 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Updated 2 weeks ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- ☆14Updated 5 months ago
- Motif Scan and Enrichment Analysis (MoSEA)☆17Updated 5 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 3 months ago
- Clinical interpretation of somatic mutations in cancer☆50Updated 10 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 5 years ago
- ☆36Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- ☆38Updated last year
- Comprehensive analysis of small RNA sequencing data☆34Updated 7 months ago
- ☆31Updated last year
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Updated 3 years ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Updated 6 years ago