liubenyuan / py-oopsi
Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning
☆14Updated 2 years ago
Alternatives and similar repositories for py-oopsi:
Users that are interested in py-oopsi are comparing it to the libraries listed below
- Grid cell data analysis package.☆6Updated 9 years ago
- SpikeForest -- spike sorting analysis for website☆16Updated 4 years ago
- Some python functions to supplement the NEURON python module☆29Updated 5 years ago
- course materials for the 2017 Summer Workshop on the Dynamic Brain☆11Updated 7 years ago
- Code for fitting neural spike trains with nonparametric hidden Markov and semi-Markov models built upon mattjj's PyHSMM framework.☆14Updated 6 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆18Updated 7 years ago
- Database for experimental neuroscience laboratories☆47Updated 2 months ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Recordings of 10k neurons during spontaneous behaviors☆51Updated last year
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Machine Learning Methods for Neural Data Analysis☆14Updated this week
- DataJoint pipeline for IBL project☆20Updated 2 years ago
- Main repository for IBL rig code☆22Updated last week
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- Python tools for analysis of neurophysiology data☆37Updated last year
- Tikhonov regression in python☆32Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆39Updated last month
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Updated 8 years ago
- latent manifold tuning model / P-GPLVM☆12Updated 5 years ago
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆28Updated 6 years ago
- ☆9Updated 4 years ago
- code for Cunningham and Ghahramani (2015), Journal of Machine Learning Research☆27Updated 8 years ago
- Preprint classes for biological journals☆30Updated 4 years ago
- Codebase for Cross-Spectral Factor Analysis (Gallagher et al., 2017)☆13Updated 4 years ago
- Schemata and libraries for neuroscientific data☆24Updated 6 months ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆14Updated 4 years ago
- Estimating the functional dimensionality of neural representations☆19Updated 3 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago