Alternatives and similar repositories for py-oopsi:

Users that are interested in py-oopsi are comparing it to the libraries listed below

• pillowlab / LNPfitting
  Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood
  ☆18Updated 7 years ago
• flatironinstitute / spikeforest_old
  SpikeForest -- spike sorting analysis for website
  ☆16Updated 4 years ago
• slinderman / pyhsmm_spiketrains
  Code for fitting neural spike trains with nonparametric hidden Markov and semi-Markov models built upon mattjj's PyHSMM framework.
  ☆14Updated 6 years ago
• mackelab / CorBinian
  CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations
  ☆19Updated 3 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 7 years ago
• frsong / pycog
  Train excitatory-inhibitory recurrent neural networks for cognitive tasks.
  ☆49Updated 9 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆50Updated last year
• mne-tools / mne-incubator
  Experimental versions of M/EEG analysis code
  ☆17Updated 2 years ago
• waq1129 / LMT
  latent manifold tuning model / P-GPLVM
  ☆12Updated 5 years ago
• ahwillia / PyNeuron-Toolbox
  Some python functions to supplement the NEURON python module
  ☆29Updated 5 years ago
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 3 years ago
• lfads / lfads-run-manager
  Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
  ☆49Updated 3 years ago
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆39Updated 2 weeks ago
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• gallantlab / tikreg
  Tikhonov regression in python
  ☆32Updated last year
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• baccuslab / pyret
  Python tools for analysis of neurophysiology data
  ☆37Updated last year
• int-brain-lab / IBL-pipeline
  DataJoint pipeline for IBL project
  ☆20Updated 2 years ago
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆13Updated 7 months ago
• AllenInstitute / SWDB_2017
  course materials for the 2017 Summer Workshop on the Dynamic Brain
  ☆11Updated 7 years ago
• anne-urai / largescale_recordings
  Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…
  ☆18Updated 3 years ago
• iahncajigas / nSTAT
  Neural Spike Train Analysis Toolbox for Matlab
  ☆34Updated 7 years ago
• voytekresearch / misshapen
  Analyze the waveform shape of neural oscillations.
  ☆12Updated 6 years ago
• dmeliza / biopreprint
  Preprint classes for biological journals
  ☆30Updated 4 years ago
• jewellsean / FastLZeroSpikeInference
  Fast Exact Spike Inference Via L0 Optimization
  ☆15Updated 4 years ago
• voytekresearch / pacpy
  Calculate phase-amplitude coupling in Python (and Matlab).
  ☆24Updated 7 years ago
• lacerbi / workshop-bristol-2019
  Introductory workshop to modeling and model fitting in psychophysics and neuroscience
  ☆11Updated 5 years ago
• libertyh / ising-model
  Fit an Ising model with neural spike train data using Minimum Probability Flow Learning. Based on code from Jascha Sohl-Dickstein.
  ☆18Updated 7 years ago
• flatironinstitute / ironclust
  Spike sorting software being developed at Flatiron Institute, based on JRCLUST (Janelia Rocket Cluster)
  ☆28Updated 2 years ago
• cunni / ldr
  code for Cunningham and Ghahramani (2015), Journal of Machine Learning Research
  ☆27Updated 8 years ago