liubenyuan / py-oopsiLinks
Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning
☆14Updated 3 years ago
Alternatives and similar repositories for py-oopsi
Users that are interested in py-oopsi are comparing it to the libraries listed below
Sorting:
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- course materials for the 2017 Summer Workshop on the Dynamic Brain☆11Updated 7 years ago
- Python tools for analysis of neurophysiology data☆37Updated last year
- Some of my python tools for computational neuroscience☆12Updated this week
- latent manifold tuning model / P-GPLVM☆12Updated 6 years ago
- Recordings of 10k neurons during spontaneous behaviors☆52Updated last year
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated last year
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- YASS: Yet Another Spike Sorter☆70Updated 2 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- python package for operant conditioning☆14Updated 11 months ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- Preprint classes for biological journals☆30Updated 4 years ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Database for experimental neuroscience laboratories☆48Updated 3 weeks ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Updated 7 years ago
- Dimensionality reduction of spikes trains☆49Updated 3 years ago
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- Spike sorting software being developed at Flatiron Institute, based on JRCLUST (Janelia Rocket Cluster)☆28Updated 3 years ago
- Neural Spike Train Analysis Toolbox for Matlab☆34Updated 7 years ago
- Code for fitting neural spike trains with nonparametric hidden Markov and semi-Markov models built upon mattjj's PyHSMM framework.☆14Updated 7 years ago
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆50Updated 9 years ago
- A quickstart guide to tensor decomposition☆72Updated 3 years ago
- This repository contains code used for the fly brain activity experiments☆18Updated 2 years ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Updated 8 years ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆14Updated 5 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- code for Cunningham and Ghahramani (2015), Journal of Machine Learning Research☆27Updated 9 years ago
- Tikhonov regression in python☆32Updated last year