Alternatives and similar repositories for prmf:

Users that are interested in prmf are comparing it to the libraries listed below

• czi-hca-comp-tools / easy-data
  easy access to benchmark datasets
  ☆50Updated 6 years ago
• bioFAM / slalom
  ☆28Updated last year
• jessemzhang / tn_test
  post-clustering differential expression test
  ☆35Updated 5 years ago
• YosefLab / FastProject
  Dimensionality reduction for single cell RNA-seq data
  ☆35Updated 4 years ago
• JCVenterInstitute / NSForest
  A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…
  ☆57Updated 3 months ago
• jzhoulab / quasildr
  Quasilinear data representations for single-cell omics data analysis
  ☆42Updated last year
• hemberg-lab / D3E
  Discrete Distributional Differential Expression
  ☆22Updated 6 years ago
• lcmmichielsen / scHPL
  ☆34Updated 8 months ago
• nghiavtr / BPSC
  Beta-Poisson model for single-cell RNA-seq data analyses
  ☆16Updated 5 years ago
• brianhie / trajectorama
  Multi-study integration of cellular trajectories
  ☆18Updated 4 years ago
• jmschrei / dragonnfruit
  A method for analyzing scATAC-seq experiments.
  ☆25Updated 3 months ago
• csoneson / rna_velocity_quant
  Evaluation of the effect of quantification choices on RNA velocity estimates
  ☆27Updated 3 years ago
• brianhie / geosketch
  Geometry-preserving random sampling
  ☆77Updated 2 months ago
• theislab / pseudodynamics
  Dynamic models for single-cell RNA-seq time series.
  ☆39Updated 6 years ago
• klarman-cell-observatory / scSVA
  Single-cell Scalable Visualization and Analytics
  ☆25Updated 5 years ago
• AllonKleinLab / PBA
  Population balance analysis
  ☆44Updated 5 years ago
• pachterlab / NYMP_2018
  ☆28Updated 5 years ago
• YosefLab / scone
  ☆53Updated 3 months ago
• willtownes / scrna2019
  supporting code for the multinomial single cell RNA-Seq paper
  ☆51Updated 4 years ago
• dpeerlab / Harmony
  Harmony framework for connecting scRNA-seq data from discrete time points
  ☆46Updated 6 months ago
• simslab / scHPF
  Single-cell Hierarchical Poisson Factorization
  ☆67Updated 2 years ago
• saezlab / dorothea-py
  Dorothea package in Python
  ☆11Updated 2 years ago
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆39Updated 2 years ago
• JEFworks / MUDAN
  Multi-sample Unified Discriminant ANalysis
  ☆72Updated last year
• markrobinsonuzh / scRNAseq_clustering_comparison
  A study to compare methods for clustering of scRNA-seq data
  ☆42Updated 6 months ago
• markrobinsonuzh / conquer
  consistent quantification of external RNA-seq data sets
  ☆58Updated last year
• MSingerLab / COMETSC
  COMET Single-Cell Marker Detection tool
  ☆31Updated 2 years ago
• dgrun / RaceID
  Algorithm for the inference of cell types from single-cell RNA-seq data.
  ☆44Updated 8 years ago
• sandhya212 / BISCUIT_SingleCell_IMM_ICML_2016
  R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
  ☆65Updated 6 years ago
• fabilab / northstar
  Single cell type annotation guided by cell atlases, with freedom to be queer
  ☆25Updated 2 years ago