snewhouse / enrichr-apiLinks
python script to programmatically enrich your data using Enrichr API
☆12Updated 8 years ago
Alternatives and similar repositories for enrichr-api
Users that are interested in enrichr-api are comparing it to the libraries listed below
Sorting:
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated 2 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 7 years ago
- ☆21Updated 8 years ago
- Normalization for single cell RNA-seq data☆48Updated 2 months ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 8 months ago
- easy access to benchmark datasets☆50Updated 7 years ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Exploratory data analysis for pooled CRISPR/Cas9 screens☆21Updated 8 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Scalable RNA-seq analysis☆73Updated 4 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆44Updated 5 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- ☆12Updated 6 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- ☆10Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.☆14Updated 2 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 4 years ago
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆45Updated 8 years ago
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆78Updated 4 years ago
- [DEPRECATED] Docker containers for Bioconductor☆49Updated 2 years ago
- VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:☆34Updated 2 years ago