Alternatives and similar repositories for fredhutch.io:

Users that are interested in fredhutch.io are comparing it to the libraries listed below

• ISA-tools / Risa
  Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…
  ☆20Updated 6 years ago
• waldronlab / bioconductor
  Helper script for bioconductor/bioconductor_docker
  ☆10Updated last week
• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆20Updated 3 months ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• gmbecker / genbankr
  ☆17Updated last year
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 7 months ago
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆20Updated 9 months ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• nellore / runs
  Scripts for reproducing analyses of large RNA-seq datasets
  ☆15Updated 5 years ago
• vsbuffalo / gplyr
  ☆18Updated 7 years ago
• datacarpentry / genomics-r-intro
  Intro to R and RStudio for Genomics
  ☆28Updated this week
• seandavi / MachineLearningIntro
  Machine learning use cases for teaching
  ☆13Updated 7 years ago
• Bioconductor / TENxBrainAnalysis
  R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
  ☆12Updated last year
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 4 years ago
• gexijin / iDEP-old-version
  iDEP: integrated Differential Expression & Pathway analysis
  ☆15Updated 5 years ago
• HCBravoLab / metagenomeFeatures
  R package for annotating metagenomic datasets with taxonomic information
  ☆10Updated 5 years ago
• vsoch / singularity-shiny
  a quick shiny server in a Singularity Container. For @griznog!
  ☆17Updated 6 years ago
• seandavi / Bioc2017BigDataWorkshopSession
  Tutorial for working with cloud infrastructure and AWS from R
  ☆20Updated 7 years ago
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated last year
• sarbal / EGAD
  Gene network analysis
  ☆19Updated 2 years ago
• mikelove / asthma
  RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
  ☆19Updated 7 years ago
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 7 years ago
• vals / python-gprofiler
  ☆12Updated 6 years ago
• gabrielodom / pathwayPCA
  integrative pathway analysis with modern PCA methodology and gene selection
  ☆11Updated last year
• fredhutchio / intro-bioinformatics
  Website and slides for intro to bioinformatics class at Fred Hutch
  ☆12Updated 6 years ago
• grunwaldlab / analysis_of_microbiome_community_data_in_r
  This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…
  ☆17Updated last year
• waldronlab / TCGAutils
  Toolbox package for organizing and working with TCGA data
  ☆26Updated 2 months ago
• davemcg / awesome_genome_browsers
  ☆10Updated 5 years ago
• biodatascience / compbio
  Introduction to Computational Biology
  ☆31Updated 3 months ago
• MaayanLab / geo2enrichr
  A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.
  ☆14Updated last year