Tong-Chen / NGSLinks
Scripts for next generation sequencing
☆49Updated 5 years ago
Alternatives and similar repositories for NGS
Users that are interested in NGS are comparing it to the libraries listed below
Sorting:
- ☆89Updated 4 years ago
- FEELnc : FlExible Extraction of LncRNA☆90Updated last month
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- A versatile aligning pipeline for bisulfite sequencing data☆65Updated 6 years ago
- ☆50Updated 6 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated last month
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- RNA-Seq analysis workflow☆104Updated 4 years ago
- ☆58Updated last month
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- Allele-specific alignment sorting☆58Updated 2 years ago
- Coding-Non-Coding Index (CNCI)☆40Updated 7 years ago
- DEG analysis and KEGG/GO enrichment analysis☆69Updated 7 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆83Updated 2 years ago
- A simplified pipeline for ctDNA sequencing data analysis☆37Updated 7 years ago
- HLA typing for Sanger Based Test☆17Updated 2 years ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆55Updated 4 years ago
- release version☆54Updated 3 years ago
- A small-RNA sequencing analysis pipeline☆89Updated 2 months ago
- Microsatellite instability (MSI) detection for tumor only data.☆108Updated last year
- WisecondorX — An evolved WISECONDOR☆101Updated last week
- Variant Calling Pipeline Using GATK4 and Nextflow☆57Updated 2 years ago
- Finder of Somatic Fusion Genes in RNA-seq data☆146Updated 2 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- Exome/Capture/RNASeq Pipeline Implementation using snakemake☆47Updated 7 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆41Updated 5 years ago
- ☆50Updated 4 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆153Updated last year
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago