This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepage: <https://potatobreeding.cals.wisc.edu/software/>
☆14Dec 11, 2023Updated 2 years ago
Alternatives and similar repositories for rrBLUP
Users that are interested in rrBLUP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Random stuff for BLUPF90 programs☆17Aug 28, 2023Updated 3 years ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 7 months ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- ☆13Oct 15, 2024Updated last year
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆29Nov 22, 2020Updated 5 years ago
- ☆11Aug 20, 2019Updated 7 years ago
- MultiGS: A Comprehensive and User-Friendly Genomic Prediction Platform Integrating Statistical, Machine Learning, and Deep Learning Model…☆17Feb 20, 2026Updated 6 months ago
- G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluat…☆18Sep 27, 2017Updated 8 years ago
- Automated Machine Learning for Environmental Data-Driven Genome Prediction☆16Sep 12, 2025Updated 11 months ago
- blupADC:An useful tool for animal and plant breeding☆32Nov 22, 2024Updated last year
- HIBLUP is an Integration of Statistical Methods Under BLUP Framework for Genomic Selection and Prediction☆30Oct 15, 2021Updated 4 years ago
- Plant breeding simulations with AlphaSimR☆31Jan 5, 2025Updated last year
- ☆38Feb 5, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A pipeline for isoseq☆23Jun 8, 2018Updated 8 years ago
- ☆10Jun 29, 2021Updated 5 years ago
- DNNGP: Deep neural network for genomic prediction☆89Jul 30, 2025Updated last year
- ☆15Nov 12, 2017Updated 8 years ago
- Convert GFF file to GenBank file format while extracting the sequences between the annotated regions☆14Sep 6, 2023Updated 2 years ago
- ☆17Jun 14, 2019Updated 7 years ago
- Data files useful for BLUPF90 programs☆19Aug 4, 2026Updated 3 weeks ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 7 years ago
- GEFormer is a genome-wide prediction model for genotype-environment interactions based on a deep learning approach designed to predict ma…☆18Jan 15, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- circos pipeline☆20May 8, 2021Updated 5 years ago
- R Package rrBLUP in Python☆26Mar 26, 2024Updated 2 years ago
- DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.☆62Dec 3, 2021Updated 4 years ago
- PDLLMs: A group of tailored DNA large language models (LLMs) for analyzing plant genomes☆56Jun 5, 2026Updated 2 months ago
- Nimbus is a Ruby gem to implement Random Forest algorithms in a genomic selection context☆59Jun 8, 2026Updated 2 months ago
- TrGP aims to get knowledge from the source task's learning system to improve the target genomic prediction (GP) task.☆14Dec 12, 2023Updated 2 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆12Jun 26, 2026Updated 2 months ago
- NLR annotation tool☆39Mar 6, 2024Updated 2 years ago
- Fast inference for Generalised Linear Mixed Models.☆14Jan 17, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆32Updated this week
- A KMER-based genome-wIde Assocation testing approach on polyploids☆68Jul 29, 2026Updated last month
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Genomic Annotation in Livestock for positional candidate LOci☆14Feb 26, 2021Updated 5 years ago
- ☆117Jul 16, 2026Updated last month
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated last year