masuday / dataLinks
Data files useful for BLUPF90 programs
☆19Updated 4 years ago
Alternatives and similar repositories for data
Users that are interested in data are comparing it to the libraries listed below
Sorting:
- ☆25Updated 4 years ago
- R package for pedigree inference based on SNP data☆27Updated 2 weeks ago
- Estimating Effective Migration Surfaces☆105Updated last year
- Haplotype based scans for selection☆131Updated this week
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- a bash pipeline for RAD sequencing☆55Updated 7 months ago
- R functions related to pedigrees☆14Updated last year
- Methods for examining PCA locally along the genome.☆83Updated last year
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 5 months ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆11Updated 4 months ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆50Updated 4 months ago
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆87Updated 4 years ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Repository for speciation genomics website☆26Updated this week
- ☆83Updated 2 months ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- A library for running k-mers based GWAS☆114Updated 10 months ago
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 7 months ago
- Tutorial about R package PopGenome☆43Updated 6 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆61Updated 10 months ago
- Shiny apps for teaching Population Genetics☆65Updated 2 years ago
- Presentations from the course☆38Updated 2 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated 11 months ago
- blupADC:An useful tool for animal and plant breeding☆29Updated 9 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆90Updated last year
- Perform GWAS using the FarmCPU model.☆23Updated 8 months ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago