masuday / dataLinks
Data files useful for BLUPF90 programs
☆19Updated 4 years ago
Alternatives and similar repositories for data
Users that are interested in data are comparing it to the libraries listed below
Sorting:
- R package for pedigree inference based on SNP data☆28Updated last month
- ☆27Updated 5 years ago
- Estimating Effective Migration Surfaces☆110Updated 2 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆66Updated 2 weeks ago
- Haplotype based scans for selection☆140Updated last month
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆56Updated 5 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆44Updated 6 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Repository for speciation genomics website☆27Updated 5 months ago
- a bash pipeline for RAD sequencing☆55Updated last year
- Methods for examining PCA locally along the genome.☆88Updated last year
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Updated 10 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆30Updated 7 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 3 months ago
- Population genetics analyses from NGS data☆26Updated 4 years ago
- A pipeline that accepts a VCF file to run through Admixture☆63Updated last year
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆22Updated 2 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Shiny apps for teaching Population Genetics☆67Updated 3 years ago
- A set of functions to visualise genotypes based on a VCF☆88Updated 4 years ago
- Perform GWAS using the FarmCPU model.☆24Updated last year
- Genomic Annotation in Livestock for positional candidate LOci☆13Updated 4 years ago
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆88Updated 4 years ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆85Updated 2 weeks ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 9 months ago
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆45Updated last year
- Tutorial about R package PopGenome☆43Updated 6 years ago
- Fitting latent factor mixed models☆13Updated 5 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago