masuday / dataLinks
Data files useful for BLUPF90 programs
☆19Updated 4 years ago
Alternatives and similar repositories for data
Users that are interested in data are comparing it to the libraries listed below
Sorting:
- R package for pedigree inference based on SNP data☆28Updated 2 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆54Updated last month
- Haplotype based scans for selection☆134Updated last week
- ☆26Updated 4 years ago
- R functions related to pedigrees☆14Updated last month
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆92Updated 2 years ago
- Estimating Effective Migration Surfaces☆107Updated 2 years ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆12Updated 6 months ago
- Helpful handful of programs, completely open-source and free☆11Updated 4 years ago
- Shiny apps for teaching Population Genetics☆66Updated 2 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Repository for speciation genomics website☆26Updated 2 months ago
- Methods for examining PCA locally along the genome.☆85Updated last year
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- a bash pipeline for RAD sequencing☆55Updated 9 months ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated last month
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆35Updated last year
- A pipeline that accepts a VCF file to run through Admixture☆63Updated 9 months ago
- Tutorial about R package PopGenome☆44Updated 6 years ago
- Perform GWAS using the FarmCPU model.☆24Updated 10 months ago
- ☆109Updated 3 weeks ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 7 months ago
- ☆85Updated 4 months ago
- A library for running k-mers based GWAS☆116Updated last year
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- feature-based deep learning for the identification of selective sweeps☆57Updated 4 months ago
- ☆26Updated 4 years ago