syntheke / bayesRLinks
Bayesian hierarchical model for complex trait analysis
☆44Updated last year
Alternatives and similar repositories for bayesR
Users that are interested in bayesR are comparing it to the libraries listed below
Sorting:
- Generalized linear Mixed Model Association Tests☆42Updated last year
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- tools to efficiently retrieve and calculate LD☆33Updated 3 years ago
- QTL analysis software for high-dimensional data and complex cross designs☆34Updated last month
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆32Updated last month
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated last week
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆40Updated last year
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Integrative analysis of structural variations.☆40Updated last year
- Sequence kernel association test (SKAT)☆50Updated 5 months ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆45Updated 4 months ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 7 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆50Updated 3 months ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 4 months ago
- ☆30Updated 3 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Glimma R package☆50Updated 10 months ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- ☆22Updated 8 years ago
- Experimental EIGENSOFT performance improvements.☆22Updated 10 years ago
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆13Updated 7 years ago
- Evolutionary Transcriptomics with R☆44Updated last week
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 3 months ago
- Grid and ggplot2 based visualization for biological data☆113Updated last year
- Genomic plot in trellis layout☆40Updated last year
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago