galaxyproject / KegAlignLinks
fork of the GPU genome aligner
☆34Updated last week
Alternatives and similar repositories for KegAlign
Users that are interested in KegAlign are comparing it to the libraries listed below
Sorting:
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆54Updated 10 months ago
- perSVade: personalized Structural Variation detection☆40Updated last week
- A Nextflow pipeline for evaluating assembly quality☆38Updated 2 months ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆57Updated this week
- Linear-time de novo Long Read Assembler☆41Updated 3 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆59Updated 4 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- ☆48Updated 2 months ago
- ☆20Updated 3 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆54Updated last year
- MCHelper: An automatic tool to curate transposable element libraries☆45Updated 6 months ago
- A program for assessing the T2T genome continuity☆92Updated last month
- Dot: An interactive dot plot viewer for comparative genomics☆35Updated 2 years ago
- ☆29Updated 2 years ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆46Updated 2 years ago
- methods for orphan gene prediction paper optimization☆25Updated 4 years ago
- ☆31Updated 6 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Computational Analysis of Gene Expression Evolution☆45Updated 5 months ago
- Complete assemblies of non-human primate genomes☆56Updated 8 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆33Updated 4 years ago
- ☆32Updated last year
- ULTRA Locates Tandemly Repetitive Areas☆40Updated 3 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆47Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 2 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆50Updated 2 months ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 6 months ago