galaxyproject / KegAlignLinks
fork of the GPU genome aligner
☆20Updated last month
Alternatives and similar repositories for KegAlign
Users that are interested in KegAlign are comparing it to the libraries listed below
Sorting:
- ☆20Updated 3 years ago
 - Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 7 months ago
 - Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 4 months ago
 - ☆58Updated last year
 - A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆45Updated this week
 - PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆41Updated last month
 - VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated 2 weeks ago
 - Linear-time de novo Long Read Assembler☆41Updated last week
 - In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
 - Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 6 months ago
 - GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆59Updated last year
 - a broadly applicable tool for automated gene identification and retrieval☆32Updated 10 months ago
 - A dotplot generator for large chromosomes☆43Updated 2 years ago
 - A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.☆36Updated 6 months ago
 - ☆46Updated last week
 - ☆45Updated 2 weeks ago
 - ☆29Updated 2 years ago
 - ☆21Updated 8 months ago
 - Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated last month
 - Correcting errors in noisy long reads using variation graphs☆50Updated 2 years ago
 - A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
 - Ancient microbiome snakemake workflow☆26Updated 6 months ago
 - MarginPolish: Graph based assembly polishing☆47Updated 4 years ago
 - A tool for de novo clustering of long transcriptomic reads☆15Updated 3 years ago
 - perSVade: personalized Structural Variation detection☆40Updated last month
 - Complete assemblies of non-human primate genomes☆51Updated 5 months ago
 - Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆63Updated last year
 - ☆66Updated this week
 - A versatile pairwise aligner for genomic and spliced nucleotide sequences☆57Updated last year
 - Banded Striped DNA Sequence Alignment☆47Updated 2 years ago