A middleware abstraction library that provides a simple programming interface to various compute and storage resources.
☆37May 30, 2024Updated last year
Alternatives and similar repositories for xenon
Users that are interested in xenon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- Software mention extraction and linking from scientific articles☆14Sep 2, 2022Updated 3 years ago
- ☆10Feb 28, 2018Updated 8 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- A set of command line tools based on R and JavaScript.☆17Apr 21, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- ☆93Feb 25, 2026Updated last month
- Software Development Guide☆53Updated this week
- Workflows I find helpful for fungal genome annotation☆21Jun 30, 2023Updated 2 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Mar 2, 2023Updated 3 years ago
- ☆10Aug 28, 2025Updated 7 months ago
- Gene lists related to cancer immunotherapy☆14Sep 11, 2024Updated last year
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆39Apr 13, 2026Updated last week
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 5 years ago
- Create cwl workflows by writing a simple Python script☆40Apr 29, 2020Updated 5 years ago
- A collection of utilities for working with next generation (MPS) sequencing data in Groovy☆15Mar 2, 2026Updated last month
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- NGS Language Bindings☆122Dec 6, 2023Updated 2 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆53Mar 27, 2018Updated 8 years ago
- HPC Python Workshop at RSECon22☆14Oct 17, 2022Updated 3 years ago
- Continuous Integration and Continuous developement for scientific applications☆11May 19, 2020Updated 5 years ago
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Parallel Programming in Python☆11Updated this week
- Emulator of the Enigma Encoding Machine☆10Nov 9, 2025Updated 5 months ago
- CWL on Kubernetes☆52Feb 4, 2026Updated 2 months ago
- HashiCorp Nomad driver plugin - Singularity☆27Mar 30, 2023Updated 3 years ago
- Minimum Bait Cover Toolkit Syotti.☆15Jan 22, 2025Updated last year
- Düsseldorf Advanced Material Simulation Kit (DAMASK) "live plotter" for Jupyter☆10May 8, 2019Updated 6 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13May 1, 2023Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 9, 2026Updated last week
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Feb 17, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- RNA Fusion Detection and Quantification☆18Oct 31, 2018Updated 7 years ago
- ☆14Mar 8, 2017Updated 9 years ago
- DataCite REST API☆15Apr 10, 2026Updated last week
- A python package with useful methods concernig the FACT-telescope☆13Apr 7, 2021Updated 5 years ago
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- ☆15Apr 2, 2025Updated last year
- The Research Software Directory is a content management system that is tailored to software.☆48Oct 21, 2024Updated last year