Visualising data frames as funky heatmaps 📊, the Python implementation
☆26Feb 6, 2025Updated last year
Alternatives and similar repositories for funkyheatmappy
Users that are interested in funkyheatmappy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A repository for benchmarking spatial deconvolution and mapping tools☆37May 13, 2025Updated last year
- Sample representation benchmark for single-cell data☆13Jun 12, 2026Updated 2 months ago
- factor models for omics data☆46Updated this week
- Build contrasts for models defined with formulaic☆13Updated this week
- Differential spatial enrichment across conditions☆28Jul 14, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆21Updated this week
- Cross-attention-based cell-cell interaction inference from ST data.☆22Jul 31, 2026Updated 2 weeks ago
- Simple scVI implementation☆13Updated this week
- Single-cell Analysis of Perturbational Effects using Machine Learning☆20Oct 9, 2025Updated 10 months ago
- Code companion to the publication "High resolution mapping of the breast cancer tumor microenvironment using integrated single cell, spat…☆35Nov 30, 2023Updated 2 years ago
- AnnData interoperability in R☆194Updated this week
- ☆18May 15, 2026Updated 2 months ago
- Package for the analysis of Transcripts outside segmented cells in ST data☆31Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆49Jan 28, 2026Updated 6 months ago
- Robust and scalable single-cell signature scoring☆28Jul 28, 2026Updated 2 weeks ago
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.☆16Updated this week
- ☆51Jul 22, 2026Updated 3 weeks ago
- ☆20Jul 4, 2026Updated last month
- a cutting-edge cell segmentation model specifically designed for single-molecule resolved spatial omics datasets. It addresses the challe…☆90May 25, 2026Updated 2 months ago
- Automatically annotate cell types, consistently across samples.☆27Updated this week
- Tissue reassembly with generative AI☆32Jul 5, 2026Updated last month
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆110Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Learning cell fate landscapes from spatial transcriptomics using Fused Gromov-Wasserstein☆32Oct 21, 2025Updated 9 months ago
- ☆31Aug 7, 2026Updated last week
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.☆69Apr 5, 2024Updated 2 years ago
- https://sparrow-pipeline.readthedocs.io/en/latest/☆34Updated this week
- Configure Vitessce using existing Scverse plotting APIs☆25Aug 7, 2026Updated last week
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (e…☆35Updated this week
- A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍☆77May 20, 2021Updated 5 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆14May 16, 2026Updated 2 months ago
- numcodecs Rust API for buffer compression☆14Jul 20, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- Pareto Task Inference in Python☆23Updated this week
- ☆35Jun 11, 2026Updated 2 months ago
- Workflow for somatic variant calling of long read data☆26Updated this week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- Optimal gating strategies for flow and mass cytometry.☆16Jul 22, 2026Updated 3 weeks ago
- CellPolaris☆14Jan 11, 2026Updated 7 months ago