Visualising data frames as funky heatmaps π, the Python implementation
β27Feb 6, 2025Updated last year
Alternatives and similar repositories for funkyheatmappy
Users that are interested in funkyheatmappy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A repository for benchmarking spatial deconvolution and mapping toolsβ37May 13, 2025Updated last year
- Sample representation benchmark for single-cell dataβ13Jun 12, 2026Updated 2 months ago
- factor models for omics dataβ47Updated this week
- Build contrasts for models defined with formulaicβ13Updated this week
- Differential spatial enrichment across conditionsβ28Jul 14, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- FISH Iterative Cell Typingβ11Mar 24, 2024Updated 2 years ago
- Scalable framework for integrating single-cell omics with genetic data using AnnData.β21Updated this week
- Cross-attention-based cell-cell interaction inference from ST data.β22Jul 31, 2026Updated last month
- Simple scVI implementationβ13Updated this week
- Single-cell Analysis of Perturbational Effects using Machine Learningβ20Oct 9, 2025Updated 10 months ago
- Code companion to the publication "High resolution mapping of the breast cancer tumor microenvironment using integrated single cell, spatβ¦β36Nov 30, 2023Updated 2 years ago
- AnnData interoperability in Rβ195Updated this week
- β18Aug 25, 2026Updated last week
- Package for the analysis of Transcripts outside segmented cells in ST dataβ31Updated this week
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- β49Jan 28, 2026Updated 7 months ago
- Robust and scalable single-cell signature scoringβ28Updated this week
- k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.β16Updated this week
- β50Aug 24, 2026Updated last week
- β20Jul 4, 2026Updated 2 months ago
- a cutting-edge cell segmentation model specifically designed for single-molecule resolved spatial omics datasets. It addresses the challeβ¦β90May 25, 2026Updated 3 months ago
- Automatically annotate cell types, consistently across samples.β27Updated this week
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.β12Mar 9, 2021Updated 5 years ago
- Tissue reassembly with generative AIβ32Jul 5, 2026Updated last month
- Open source password manager - Proton Pass β’ AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy imagesβ111Updated this week
- Learning cell fate landscapes from spatial transcriptomics using Fused Gromov-Wassersteinβ32Oct 21, 2025Updated 10 months ago
- β31Aug 7, 2026Updated 3 weeks ago
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.β70Apr 5, 2024Updated 2 years ago
- https://sparrow-pipeline.readthedocs.io/en/latest/β34Updated this week
- Configure Vitessce using existing Scverse plotting APIsβ25Aug 7, 2026Updated 3 weeks ago
- scDoRI (single-cell Deep multi-Omic Regulatory Inference) is a deep learning model to infer enhancer-mediated gene regulatory networks (eβ¦β35Aug 15, 2026Updated 2 weeks ago
- A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. πβ77May 20, 2021Updated 5 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.β14May 16, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off β’ AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- numcodecs Rust API for buffer compressionβ15Jul 20, 2026Updated last month
- a dataloader to work with large single cell datasets from lamindbβ41Aug 27, 2026Updated last week
- Pareto Task Inference in Pythonβ23Updated this week
- β35Jun 11, 2026Updated 2 months ago
- Workflow for somatic variant calling of long read dataβ27Updated this week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systemsβ39Jul 11, 2025Updated last year
- Optimal gating strategies for flow and mass cytometry.β16Jul 22, 2026Updated last month