Python image segmentation plugin
☆31Jan 13, 2021Updated 5 years ago
Alternatives and similar repositories for segmentify
Users that are interested in segmentify are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 3 months ago
- ☆14Jan 25, 2024Updated 2 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 2 months ago
- ☆23Mar 26, 2021Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated 2 weeks ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Apr 2, 2026Updated last week
- 2D image registration in python, using napari.☆16Dec 7, 2021Updated 4 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated last year
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆18Mar 30, 2026Updated last week
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Dataset EXploration & Processing☆33May 11, 2023Updated 2 years ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated last year
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Jul 18, 2025Updated 8 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- ImageJ plugin for building figures☆16Sep 13, 2023Updated 2 years ago
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆31Sep 14, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ilastik plugin for napari☆15Mar 2, 2026Updated last month
- Multi-handle range slider widget for PyQt/PySide☆47Jun 28, 2021Updated 4 years ago
- Discover, install, and share napari plugins☆54Mar 6, 2026Updated last month
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 9 months ago
- GPU-accelerated image processing using CLIJ via pyimagej in python☆10Jan 8, 2021Updated 5 years ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated last year
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆22Aug 6, 2025Updated 8 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 6 months ago
- Browse your OMERO database from within napari.☆40Jan 15, 2026Updated 2 months ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated 11 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆163Updated this week
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated 8 months ago
- For laying organizational groundwork☆18Jul 12, 2020Updated 5 years ago