Specification for the bioimage.io model description file.
☆23May 22, 2026Updated last week
Alternatives and similar repositories for spec-bioimage-io
Users that are interested in spec-bioimage-io are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python libraries for loading, running and packaging bioimage.io models☆38May 18, 2026Updated last week
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆60Jun 30, 2025Updated 10 months ago
- Command-line client for Fractal☆49May 21, 2026Updated last week
- ☆11May 6, 2024Updated 2 years ago
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- python tools for BigDataViewer☆23Dec 29, 2024Updated last year
- 3D virtual staining with 2D and 2.5D U-Nets☆32Jul 29, 2023Updated 2 years ago
- The Java library to run Deep Learning models☆34May 14, 2026Updated 2 weeks ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- A distributed application framework for large-scale data management and AI model serving☆23May 2, 2026Updated 3 weeks ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆43May 19, 2026Updated last week
- Creating figures and animations for multi-channel images with a focus on microscopy.☆82Dec 16, 2024Updated last year
- Venus method files in the “.pkg” format for the Semi Automated Passaging, Seeding and Maintenance, of the Allen cell collection of hiPSC …☆11Dec 17, 2020Updated 5 years ago
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆22May 11, 2026Updated 2 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Distributed segmentation for bio-image-analysis☆42Jan 18, 2026Updated 4 months ago
- Deep-learning library for image restoration.☆136Updated this week
- Block-wise operations for large nD volumes☆45May 12, 2026Updated 2 weeks ago
- A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.☆41Apr 24, 2026Updated last month
- A python package for fitting splines.☆23May 8, 2026Updated 3 weeks ago
- ☆113May 14, 2026Updated 2 weeks ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Apr 20, 2026Updated last month
- ilastik-shell, applets, and workflows to string them together.☆397May 19, 2026Updated last week
- ☆12Jan 10, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Transformer-based cell tracking for live-cell microscopy☆130Mar 31, 2026Updated last month
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 5 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- ☆17Sep 13, 2024Updated last year
- GPU-accelerated Image Processing library for C++☆16Updated this week
- Reference implementation of the Graph Exchange File Format☆39May 20, 2026Updated last week
- Old academic project for my PhD - no longer maintained by me: fast gaussian and derivative convolutional filters☆10May 1, 2019Updated 7 years ago
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Sep 15, 2025Updated 8 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Functional image processing☆14May 31, 2024Updated last year
- Awesome resources related to Galaxy project☆11Nov 23, 2024Updated last year
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆92Mar 24, 2026Updated 2 months ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆27May 4, 2026Updated 3 weeks ago
- Trivial example to show using Java from Clojure in deps.edn project☆18May 26, 2023Updated 3 years ago
- Open Source Cross-Platform C++ library to read CZI image files☆72Sep 30, 2022Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆41Apr 21, 2025Updated last year