An application for interactive visualization, navigation, and editing of object tracking results
☆14Nov 1, 2026Updated this week
Alternatives and similar repositories for napari-track-edit
Users that are interested in napari-track-edit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A spatial graph datastructure for python☆11Updated this week
- Module to read and "work" with lineage trees☆12Updated this week
- Multi-Object Tracking with Integer Linear Equations☆42Jul 21, 2026Updated 3 months ago
- Graph-based framework to manipulate and analyze cell lineages from cell tracking data☆24Updated this week
- Reference implementation of the Graph Exchange File Format☆42Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Particle tracking by solving linear assignment problem.☆69Jul 30, 2026Updated 3 months ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆42Updated this week
- network-flow based object tracking☆10Sep 14, 2026Updated last month
- Block-wise task scheduling for large nD volumes.☆34Updated this week
- ☆11Aug 30, 2023Updated 3 years ago
- A common data structure and basic tools for multi-object tracking.☆15Oct 16, 2026Updated 3 weeks ago
- Tiled processing of arbitrarily large images — any image, any function.☆20Updated this week
- A 3D interactivity toolbox for napari☆38Jul 8, 2025Updated last year
- ☆27Oct 30, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 6, 2026Updated 8 months ago
- dask empowered fast4dreg☆17Mar 11, 2026Updated 7 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- A python package for fitting splines.☆24Oct 18, 2026Updated 2 weeks ago
- A web-based, time-series visualizer for tracked segmented data.☆17Updated this week
- Main tasks for the Fractal analytics platform☆28Updated this week
- Cell tracking and segmentation software☆210Updated this week
- Trainable 2D projection of 3D microscopy stacks using deep learning☆11Jul 9, 2024Updated 2 years ago
- Transformer-based cell tracking for live-cell microscopy☆160Sep 11, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- NL‑BIOMERO delivers a full containerized stack to run OMERO together with the BIOMERO 2.0 framework. It provides Docker/Podman configurat…☆13Updated this week
- Higher-Order Cell Tracking (HOCT)☆27Oct 16, 2026Updated 3 weeks ago
- ☆15Sep 4, 2026Updated 2 months ago
- Real-time feedback control microscopy for automation of optogenetic targeting☆19Oct 19, 2026Updated 2 weeks ago
- A BioIO reader plugin for reading Zarr files in the OME format.☆15Updated this week
- Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction☆81Updated this week
- Yet Another Ome-ZARR Schema❗️☆24Updated this week
- Data Inspection Plugin, designed to streamline file navigation and enhance the efficiency of data inspection.☆15Dec 22, 2025Updated 10 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆22Aug 10, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Interactive visualization and sharing of cell tracking data in the browser☆49Oct 27, 2026Updated last week
- A GPU-accelerated web application for visualization, annotation and sharing of spatial biology data☆15Updated this week
- ☆20May 5, 2023Updated 3 years ago
- GPU accelerated post-processing for 2D or 3D imaging spatial transcriptomics data.☆10Updated this week
- StarDist plugin for napari☆42Aug 24, 2024Updated 2 years ago
- Source materials for a textbook on AI in Microscopy☆25Oct 27, 2026Updated last week
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆26Jul 7, 2026Updated 4 months ago