jakobtroidl / neuron-shape-reasoningLinks
PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers
☆11Updated 3 months ago
Alternatives and similar repositories for neuron-shape-reasoning
Users that are interested in neuron-shape-reasoning are comparing it to the libraries listed below
Sorting:
- MorphoFeatures code and data☆21Updated 2 years ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆17Updated 3 weeks ago
- Block-wise task scheduling for large nD volumes.☆30Updated 2 months ago
- ☆36Updated 2 months ago
- 🌈☆56Updated 2 months ago
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆53Updated 3 weeks ago
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …☆33Updated this week
- Scalable Optical Flow-based Image Montaging and Alignment☆73Updated 3 months ago
- ☆17Updated 2 weeks ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆22Updated 2 months ago
- 3D/4D volumetric rendering of microscopy data☆23Updated last month
- Python package for deep learning based image to image transformation☆53Updated last year
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- ☆18Updated last week
- Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"☆12Updated last year
- computer vision models for single-cell phenotyping☆49Updated this week
- Distributed segmentation for bio-image-analysis☆38Updated 3 weeks ago
- Time arrow prediction for live-cell microscopy☆18Updated 11 months ago
- ☆18Updated 2 years ago
- Some tools for neuronal image analysis☆36Updated last week
- End-to-end light-sheet image analysis for mouse brains, with DL training data generated in VR☆33Updated 2 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated 2 weeks ago
- ☆20Updated last month
- Masked Autoencoder Guided Segmentation at Pixel Resolution☆15Updated last year
- ☆32Updated 2 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆56Updated last week
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆17Updated 3 months ago
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆33Updated 3 weeks ago
- Native Qt interface for Meta's Segment Anything 2 in Images and Videos☆26Updated 8 months ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago