Biologically-Constrained Graphs for Global Connectomics Reconstruction
☆11Feb 9, 2021Updated 5 years ago
Alternatives and similar repositories for biologicalgraphs
Users that are interested in biologicalgraphs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of connectomic papers and datasets.☆16Dec 25, 2023Updated 2 years ago
- ☆22Jan 6, 2026Updated 6 months ago
- Generalized algorithm for agglomerative clustering of signed graphs☆15Dec 16, 2021Updated 4 years ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆24Jul 9, 2026Updated last week
- A unified environment for DNN-based automated segmentation of neuronal EM images☆38Aug 28, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- code for paper IJCAI2022☆13Jul 2, 2024Updated 2 years ago
- Reproducing Random Numbers in Matlab and Python / NumPy☆11Dec 6, 2015Updated 10 years ago
- ☆21Nov 9, 2025Updated 8 months ago
- ☆12Feb 7, 2018Updated 8 years ago
- Energy minimization via tree-reweighted message passing (TRW) and belief propagation (BP) using Python☆15Jun 13, 2012Updated 14 years ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 5 years ago
- Simple watershed and agglomeration library for affinity graphs.☆30Sep 18, 2025Updated 10 months ago
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 months ago
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A curated list of resources for 3D segmentation of neurites in EM images☆58Mar 11, 2024Updated 2 years ago
- ☆12Feb 14, 2017Updated 9 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- Binary image skeletonization algorithms for CPUs and Nvidia GPUs☆12Jun 15, 2017Updated 9 years ago
- Version of Cvapp as used on NeuroMorpho.org. Based on Robert Cannon's initial implementation.☆16Jul 1, 2024Updated 2 years ago
- Caffe: a fast open framework for deep learning.☆13Jul 19, 2016Updated 10 years ago
- Pytorch version for DAC (ICCV2017)☆12Nov 29, 2019Updated 6 years ago
- Domain Adaptive Mitochondria Segmentation via Enforcing Inter-Section Consistency☆16Jul 16, 2023Updated 3 years ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆13Sep 7, 2021Updated 4 years ago
- A Python implementation of the Saliency Filters method☆14Dec 24, 2016Updated 9 years ago
- Test OpenEXR, HTJ2K, JXL for half/float images☆17Sep 8, 2025Updated 10 months ago
- TensorFlow implementation of entropy SGD☆12Aug 9, 2018Updated 7 years ago
- ☆15Jan 19, 2022Updated 4 years ago
- visually compact binary data☆12Apr 2, 2024Updated 2 years ago
- Medial axis transform using Delaunay triangulations☆12May 11, 2022Updated 4 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated 3 months ago
- DCEN☆13Aug 12, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Airlight estimation according to "Blind Dehazing Using Internal Patch Recurrence"☆16Oct 22, 2018Updated 7 years ago
- A general library of python tools☆17Jan 16, 2025Updated last year
- ☆15Mar 26, 2024Updated 2 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆73Nov 16, 2022Updated 3 years ago
- Mesh BDF: Barycentric Dominance Field for 3D Native Mesh Generation☆25Jul 5, 2026Updated 2 weeks ago
- 3D dense segmentation compression codec based on crack codes.☆17Jun 11, 2026Updated last month
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago