findingdan / UPDioLinks
☆14Updated last year
Alternatives and similar repositories for UPDio
Users that are interested in UPDio are comparing it to the libraries listed below
Sorting:
- ☆46Updated 6 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- CN-Learn☆30Updated 5 years ago
- ☆54Updated 2 years ago
- WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using wh…☆47Updated last year
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Updated last week
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 3 months ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Updated last year
- Burden testing against public controls☆50Updated last year
- Concordance and contamination estimator for tumor–normal pairs☆58Updated last year
- Thousand Variant Callers Project Repository☆74Updated 6 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- QDNAseq package for Bioconductor☆53Updated last year
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- CAVA (Clinical Annotation of VAriants)☆14Updated 7 years ago
- Support Vector Structural Variation Genotyper☆58Updated 5 years ago
- Basic UPD caller☆12Updated 4 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Updated 3 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆28Updated last year
- ☆26Updated last year
- Automated human exome/genome variants detection from FASTQ files☆23Updated 4 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Updated 5 years ago
- Comprehensive benchmark of structural variant callers☆48Updated 4 years ago
- CNV screening and annotation tool☆25Updated 9 years ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Updated 5 years ago
- Data and information about the Polaris study☆54Updated 6 years ago