deaconjs / ThousandVariantCallersRepoLinks
Thousand Variant Callers Project Repository
☆73Updated 5 years ago
Alternatives and similar repositories for ThousandVariantCallersRepo
Users that are interested in ThousandVariantCallersRepo are comparing it to the libraries listed below
Sorting:
- Structural Variant Index☆74Updated 6 months ago
- ☆39Updated last year
- CNV screening and annotation tool☆25Updated 8 years ago
- ☆46Updated 5 years ago
- Data and information about the Polaris study☆53Updated 5 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆47Updated this week
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆72Updated 9 months ago
- An awk-like VCF parser☆56Updated last year
- Filtering and profiling of next-generational sequencing data using region-specific rules☆77Updated last year
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆32Updated this week
- TIDDIT - structural variant calling☆73Updated 2 months ago
- CN-Learn☆29Updated 5 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆53Updated 4 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 4 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆47Updated 5 years ago
- for detecting internal tandem duplication from genome sequence data.☆11Updated 6 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆56Updated 7 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆106Updated 4 years ago
- Create "haplotype maps" of variants in order to use with Picardtools Crosscheck_Files utility, which allows for robust genotyping of func…☆28Updated last year
- Read visualizer for structural variants☆84Updated 6 years ago
- ☆53Updated 2 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆66Updated 2 years ago
- Concordance and contamination estimator for tumor–normal pairs☆59Updated 8 months ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆66Updated last year
- Support Vector Structural Variation Genotyper☆58Updated 5 years ago
- ☆41Updated 9 months ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago