A flux balance analysis machine learning classifier for microbial GWAS
☆14Jan 14, 2020Updated 6 years ago
Alternatives and similar repositories for metabolic-allele-classifiers
Users that are interested in metabolic-allele-classifiers are comparing it to the libraries listed below
Sorting:
- Code repository for machine learning and computational analysis of large-scale microbial genomics data (https://rdcu.be/9rHj)☆20May 12, 2025Updated 9 months ago
- Factor Modeling for radiomics☆12Aug 29, 2025Updated 6 months ago
- Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure☆12Sep 3, 2024Updated last year
- Utlizied brain's structural & functional connectivity to classify subjects using Graph Convolution Networks.☆12Dec 25, 2020Updated 5 years ago
- ☆13Oct 4, 2024Updated last year
- Some accessible radiomics datas were provided in this link.☆13Dec 17, 2021Updated 4 years ago
- Evaluating methods to improve model transfer for intensive care unit models☆16Jul 6, 2023Updated 2 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Jan 11, 2019Updated 7 years ago
- ☆19Mar 10, 2023Updated 3 years ago
- Radiomics Analysis for Prediction of EGFR Mutations and Ki-67 Proliferation Index in Patients with Non-Small Cell Lung Cancer☆16May 16, 2022Updated 3 years ago
- Tensorflow-keras implementation for Contrastive Reconstruction (ConRec) : a self-supervised learning algorithm that obtains image represe…☆13Feb 22, 2022Updated 4 years ago
- Predictive principal component analysis (PredPCA)☆20Nov 27, 2021Updated 4 years ago
- [Nature Biomedical Engineering, 2020] A broadly applicable algorithm for dimensionality reduction to reveal underlying trends in a range …☆17Jan 24, 2022Updated 4 years ago
- Late AMD progression classification using fundus images and genotypes☆23Aug 17, 2023Updated 2 years ago
- Tensorflow implementation of 3D CNN for brain age prediction from MRI☆20Jul 22, 2019Updated 6 years ago
- memote – the genome-scale metabolic model test suite☆145Aug 14, 2025Updated 6 months ago
- ☆24Jun 7, 2020Updated 5 years ago
- Fairness, Ethics, Explainability in AI and ML☆22Apr 18, 2020Updated 5 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Jul 6, 2023Updated 2 years ago
- Package for investigation of mulitlayer 2D heterostructures' lattices (Work in progress!)☆22Jan 17, 2021Updated 5 years ago
- Applying style transfer to convert multi-modal MRI images to have a T1 like contrast.☆26Apr 18, 2020Updated 5 years ago
- A toolkit for the calculation of radiomics features in R.☆21Mar 19, 2018Updated 7 years ago
- Repository for mzML and the corresponding examples☆34Apr 5, 2024Updated last year
- An image analysis tool for measuring microorganism colony growth☆12Dec 12, 2025Updated 2 months ago
- This module is a tool for calculating correlations such as Partial, Tetrachoric, Intraclass correlation coefficients, Bootstrap agreement…☆11Feb 16, 2026Updated 3 weeks ago
- Program and links to the material for the GloBIAS Training School 2025, Kobe, Japan.☆22Oct 27, 2025Updated 4 months ago
- ☆11Oct 7, 2025Updated 5 months ago
- A python implementation of flux balance analysis to model microbial metabolism☆28Feb 25, 2023Updated 3 years ago
- Symbolic Kinetic Models with Python☆34Jun 4, 2025Updated 9 months ago
- A repository to develop code for IBSI compliant radiomics applications☆32Jun 7, 2021Updated 4 years ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆11May 8, 2024Updated last year
- Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database☆39Apr 11, 2018Updated 7 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆32Jun 9, 2017Updated 8 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Jan 9, 2019Updated 7 years ago
- A Python interface to proteomics data repositories☆36Jun 19, 2025Updated 8 months ago
- ☆11Nov 30, 2024Updated last year
- A collection of code (mostly Jupyter notebooks) associated with entries on my blog☆12Oct 8, 2017Updated 8 years ago
- Open-source simulator for Surface Plasmon Resonance (SPR) applications implemented in C++ language.☆13Sep 3, 2019Updated 6 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆45Mar 2, 2026Updated last week