Alternatives and similar repositories for enrich_omics

Users that are interested in enrich_omics are comparing it to the libraries listed below

• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆24Updated 3 months ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 4 years ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• IEDB / PEPMatch
  ☆21Updated 3 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆39Updated 2 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 6 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated last week
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆25Updated last week
• KarchinLab / mhcnuggets
  MHC Class I and Class II neoantigen binding prediction
  ☆29Updated 2 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 3 years ago
• eternagame / DegScore
  Arnie-based DegScore tool.
  ☆25Updated 2 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 2 years ago
• gpp-rnd / stringdb
  ☆10Updated last year
• GreiffLab / immuneSIM
  ☆38Updated last year
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• haiyuan-yu-lab / PIONEER
  ☆25Updated 5 months ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆32Updated 10 months ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆22Updated 2 months ago
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆48Updated 2 weeks ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆37Updated 2 years ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 2 months ago
• MannLabs / proteomesoflife
  python based queries for the proteomesoflife neo4j network database
  ☆14Updated 4 years ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆51Updated 10 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆68Updated 2 years ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆43Updated last year