ISA-tools / mzml2isaLinks
Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure
☆12Updated last year
Alternatives and similar repositories for mzml2isa
Users that are interested in mzml2isa are comparing it to the libraries listed below
Sorting:
- Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to l…☆15Updated 2 years ago
- R interface to Chemical Translation Service (CTS)☆17Updated last year
- Metabolomics Tools for Galaxy☆21Updated 9 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- ☆21Updated 9 years ago
- Core Utils for Mass Spectrometry Data☆17Updated this week
- Nextflow-powered MS-DIAL☆10Updated 11 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 6 months ago
- Documentation and wiki for the PhenoMeNal H2020 E-Infrastructure Project☆22Updated 8 months ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- LipidLynxX provides the possibility to convert, cross-match, and link various lipid annotations to the tools supporting lipid ontology, …☆16Updated 2 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆21Updated 2 years ago
- web based visualisation of molecular interaction data☆12Updated 6 months ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Updated this week
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- ☆17Updated last year
- Python interface to amino acid properties and IEDB☆57Updated last year
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Updated 7 years ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Updated 10 months ago
- a Graph database and R package for omic data integration☆20Updated 9 years ago
- A collection of functional and scientific icons for EMBL-EBI sites.☆17Updated 5 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated 2 years ago
- ☆10Updated last year
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago
- ☆14Updated 6 years ago
- Package that facilitates pulling database entries from KEGG via its REST API☆11Updated 2 years ago
- ☆10Updated 6 years ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago