ISA-tools / mzml2isa
Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure
☆12Updated 6 months ago
Alternatives and similar repositories for mzml2isa:
Users that are interested in mzml2isa are comparing it to the libraries listed below
- R interface to Chemical Translation Service (CTS)☆14Updated 7 months ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 3 years ago
- Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to l…☆14Updated last year
- Realtime quality control for mass spectrometry data acquisition☆15Updated 4 months ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- Metabolomics Tools for Galaxy☆21Updated 8 years ago
- Core Utils for Mass Spectrometry Data☆16Updated last week
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Updated 6 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- SODAR: System for Omics Data Access and Retrieval☆16Updated this week
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 7 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆19Updated last month
- A set of metabolomics tools for use in Galaxy☆11Updated 2 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Updated last week
- PathIntegrate Python package for pathway-based multi-omics data integration☆15Updated 4 months ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆27Updated 2 years ago
- ☆14Updated 2 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆25Updated 2 months ago
- a Graph database and R package for omic data integration☆20Updated 8 years ago
- R codes for creating metamapp graphs and files☆8Updated 2 years ago
- ☆14Updated 5 years ago
- ☆20Updated last year
- Repository for mzML and the corresponding examples☆29Updated 11 months ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data