gpp-rnd / stringdb
☆10Updated last year
Alternatives and similar repositories for stringdb:
Users that are interested in stringdb are comparing it to the libraries listed below
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 6 months ago
- Code for the analyses in the human reference interactome paper.☆27Updated 2 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 2 months ago
- ☆27Updated last month
- Functional Embedding of Gene Signatures☆43Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 2 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- ☆10Updated 3 years ago
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Updated last month
- ☆38Updated last year
- A Python package for gene network analysis☆32Updated 2 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆38Updated last month
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- ☆15Updated last year
- Python package and command line tool for epitope prediction☆51Updated 9 months ago
- A platform to do RNA science☆27Updated 4 years ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated this week
- Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"☆26Updated last year
- Biological Network Integration using Convolutions☆62Updated last year
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆32Updated 9 months ago
- Connect the dots in networks.☆18Updated 4 years ago
- Knowledge-primed neural networks☆36Updated 2 years ago
- Deep learning model to predict degron sequences☆20Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Python package to load and query ARCHS4 data☆21Updated last month
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago