Alternatives and similar repositories for GPSnet:

Users that are interested in GPSnet are comparing it to the libraries listed below

• ChengF-Lab / 2019-nCoV
  Network-based Drug Repurposing for Human Coronavirus
  ☆40Updated 5 years ago
• cmap / lincs-workshop-2020
  CMap Notebooks for LINCS 2020 Workshop
  ☆46Updated 3 years ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆39Updated 11 months ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated last year
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆53Updated last year
• cmap / cmapM
  Connectivity Map analysis in MATLAB
  ☆42Updated 3 years ago
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆50Updated 8 months ago
• NeilPearson-Lilly / TractaViewer
  ☆11Updated 5 years ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆25Updated 3 months ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆54Updated last week
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 3 months ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆20Updated last week
• MaayanLab / L1000toRNAseq
  ☆14Updated 2 years ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆15Updated last week
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆26Updated 2 years ago
• hosseinshn / MOLI
  MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction
  ☆53Updated 4 years ago
• kekegg / DLEPS
  A Deep Learning based Efficacy Prediction System for drug discovery
  ☆63Updated 2 years ago
• hashemifar / DPPI
  A convolutional neural network to predict PPI interactions
  ☆41Updated 6 years ago
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆49Updated 3 years ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆28Updated 10 months ago
• enricoferrero / TargetPred
  In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data
  ☆18Updated 7 years ago
• TeoSakel / deep-drug-response
  ☆19Updated 4 years ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆35Updated 3 years ago
• yunchuankong / GEDFN
  GEDFN: Graph-Embedded Deep Feedforward Network
  ☆23Updated 5 years ago
• Barabasi-Lab / COVID-19
  Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19
  ☆27Updated 3 years ago
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆25Updated 7 years ago
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆29Updated last week
• BergmannLab / MONET
  MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236
  ☆44Updated 3 years ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated last year