Alternatives and similar repositories for GPSnet:

Users that are interested in GPSnet are comparing it to the libraries listed below

• ChengF-Lab / 2019-nCoV
  Network-based Drug Repurposing for Human Coronavirus
  ☆40Updated 5 years ago
• cmap / lincs-workshop-2020
  CMap Notebooks for LINCS 2020 Workshop
  ☆46Updated 3 years ago
• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 2 years ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆21Updated last month
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆53Updated last year
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆50Updated 9 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆26Updated 4 months ago
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆26Updated 2 years ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆40Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• DabinJeong / GOAT_multi-omics_biomarker
  Multi-omics biomarker discovery tool exploiting a gene-gene interaction network
  ☆16Updated 11 months ago
• cmap / cmapM
  Connectivity Map analysis in MATLAB
  ☆43Updated 3 years ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated last year
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 4 months ago
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆25Updated 8 years ago
• kekegg / DLEPS
  A Deep Learning based Efficacy Prediction System for drug discovery
  ☆64Updated 2 years ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• labsyspharm / smallmoleculesuite-old
  ☆15Updated last year
• danasilv / Diffuse2Direct
  Orientation of the protein-protein interaction network using network diffusion techniques
  ☆15Updated 4 years ago
• yunchuankong / GEDFN
  GEDFN: Graph-Embedded Deep Feedforward Network
  ☆23Updated 5 years ago
• emreg00 / proximity
  Drug-disease proximity based therapeutic effect screening and analysis
  ☆19Updated 7 years ago
• gpp-rnd / stringdb
  ☆10Updated last year
• broadinstitute / lincs-cell-painting
  Processed Cell Painting Data for the LINCS Drug Repurposing Project
  ☆27Updated 2 years ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated last year
• NeilPearson-Lilly / TractaViewer
  ☆11Updated 5 years ago
• snap-stanford / KGWAS
  KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
  ☆56Updated last week
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆39Updated 9 months ago
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆23Updated 2 weeks ago
• cancerdatasci / demeter2
  Inference of gene dependency from RNAi screening datasets.
  ☆18Updated 4 years ago
• Bin-Chen-Lab / RGES
  reverse gene expression score
  ☆12Updated last year