ChengF-Lab / GPSnet
☆34Updated 6 years ago
Alternatives and similar repositories for GPSnet:
Users that are interested in GPSnet are comparing it to the libraries listed below
- Network-based Drug Repurposing for Human Coronavirus☆40Updated 5 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆21Updated last month
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- Code for the analyses in the human reference interactome paper.☆26Updated 2 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 4 months ago
- Connectivity Map analysis in MATLAB☆43Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 2 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆50Updated 9 months ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- ☆26Updated 4 months ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆35Updated 4 months ago
- Functional Embedding of Gene Signatures☆40Updated last year
- Knowledge-primed neural networks☆35Updated last year
- CellBox: Interpretable Machine Learning for Perturbation Biology☆53Updated last year
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆16Updated 3 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆11Updated 5 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆64Updated 2 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- ☆20Updated 3 years ago
- Python package to load and query ARCHS4 data☆19Updated this week
- comparing drug classification methods☆19Updated 5 years ago
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆37Updated last week
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Updated last week
- ☆10Updated last year
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 3 years ago