eWaterCycle / setup-singularityLinks
GitHub action to setup singularity
☆18Updated 2 years ago
Alternatives and similar repositories for setup-singularity
Users that are interested in setup-singularity are comparing it to the libraries listed below
Sorting:
- GitHub action to setup apptainer☆16Updated 11 months ago
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆26Updated 4 years ago
- Python utilities for CWL☆42Updated this week
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆45Updated last week
- A repository to practice contributing to a Manubot manuscript☆48Updated 6 months ago
- A demo and tutorial for how to use git and singularity to make your research more portable and reproducible☆26Updated 9 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated 2 years ago
- Misc. utilities☆11Updated 6 years ago
- Configure workflow/pipeline tests using yaml files.☆71Updated last year
- A Github action for running a Snakemake workflow☆62Updated last week
- CPU and GPU deterministic and therefore fully reproducible machine learning pipelines using MLflow.☆45Updated 2 years ago
- Nextflow plugin implementation skeleton☆11Updated 3 months ago
- ☆33Updated 4 months ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Updated 9 years ago
- A small python library to adjust and annotate axis ticklabels in plots.☆52Updated 4 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- Should you cite this software?☆32Updated 5 years ago
- A package for downloading and uploading figshare data☆25Updated 2 years ago
- Simple installer for conda (and conda-likes)☆17Updated 3 weeks ago
- Port Forwarding Utility☆53Updated 2 years ago
- SQL support plugin for Nextflow☆32Updated 3 months ago
- BIH Cluster Wiki☆18Updated 2 months ago
- Convert bioinformatics file formats to Zarr☆42Updated 6 months ago
- Pretty GridEngine, Torque and Platform LSF status tables☆33Updated 9 years ago
- ☆17Updated 2 years ago
- cy3sbml: SBML for Cytoscape 3☆14Updated last month
- Monitor computational workflows in real time☆74Updated last year
- Nextflow pipeline for hyperparameter optimization of machine learning models☆24Updated last year
- YAML template engine☆41Updated 3 weeks ago
- Lab notebook for people who like the command line.