roryk / ipython-cluster-helper
Tool to easily start up an IPython cluster on different schedulers.
☆147Updated 4 years ago
Alternatives and similar repositories for ipython-cluster-helper:
Users that are interested in ipython-cluster-helper are comparing it to the libraries listed below
- Deploy Dask on DRMAA clusters☆40Updated 4 years ago
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- Tools to manage jobs on supercomputer☆40Updated 9 years ago
- deploy Dask.distributed to GridEngine (sge/pbs) cluster systems☆21Updated 8 years ago
- CGAT-ruffus is a lightweight python module for running computational pipelines☆174Updated 3 years ago
- Efficient storage of same-type, uneven-size arrays☆11Updated 6 years ago
- IPython notebooks with YAML file format☆31Updated 7 years ago
- DEPRECATED. Please visit our new repository (cytoscape/cyREST)☆27Updated 7 years ago
- ☆37Updated 8 years ago
- a nose plugin for finding and running IPython notebooks as nose tests☆80Updated 3 years ago
- Execute scripts in their own temporary environment☆72Updated 5 years ago
- High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ☆21Updated 11 years ago
- A collection of visualizations for genomics related information for use with Jupyter notebooks.☆10Updated 3 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 4 years ago
- Package template for a project using Cython☆58Updated 9 years ago
- %conda magic for IPython☆28Updated 8 years ago
- A small package of software which will help you configure an automated build and publish process, using Travis CI and GitHub Pages.☆106Updated 9 years ago
- Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).☆84Updated 2 years ago
- This is a beginner's tutorial to Snakemake☆70Updated 9 years ago
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 7 years ago
- like a conda-metapackage but for channels!☆69Updated 4 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 4 years ago
- Python Scientific Pipeline Management System☆71Updated last year
- Scripts to launch IPython parallel on a cluster and run an IPython Notebook to run the analysis.☆27Updated 11 years ago
- StarCluster is a utility for creating and managing computing clusters hosted on Amazon's Elastic Compute Cloud (EC2).☆37Updated 4 years ago
- A demo and tutorial for how to use git and singularity to make your research more portable and reproducible☆26Updated 8 years ago
- Interactive code profiling widget for IPython + Jupyter Notebook☆30Updated 8 years ago
- High throughput, pain-free big data pipelines.☆30Updated 8 years ago
- Simple spill-to-disk dictionary☆60Updated 3 years ago
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 6 years ago