Alternatives and similar repositories for qbatch

Users that are interested in qbatch are comparing it to the libraries listed below

• CoAxLab / pycombat
  Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects
  ☆14Updated 2 years ago
• boutiques / boutiques
  A cross-platform descriptive command-line framework for applications
  ☆63Updated 3 weeks ago
• bihealth / bih-cluster
  BIH Cluster Wiki
  ☆18Updated 2 months ago
• brentp / combat.py
  python / numpy / pandas / patsy version of ComBat for removing batch effects.
  ☆105Updated 7 years ago
• nf-neuro / modules
  nf-neuro is a nextflow neuroimaging library maintained by the SCIL team
  ☆18Updated 2 weeks ago
• markur4 / plotastic
  Streamlining statistical analysis by using plotting keywords in Python.
  ☆18Updated last year
• aplbrain / saber
  ☆17Updated 2 years ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆21Updated 9 years ago
• nipype / pydra
  Pydra Dataflow Engine
  ☆134Updated 2 weeks ago
• vsoch / forward
  Port Forwarding Utility
  ☆53Updated 2 years ago
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 9 years ago
• jwcarr / mantel
  Python implementation of the Mantel test, a significance test of the correlation between two distance matrices
  ☆35Updated 3 weeks ago
• AllenInstitute / mouse_connectivity_models
  Python package providing mesoscale connectivity models for mouse.
  ☆39Updated last year
• portugueslab / flammkuchen
  Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab
  ☆17Updated last year
• hms-dbmi / brainmapr
  R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …
  ☆16Updated 10 years ago
• datacarpentry / python-neuroimaging-lesson
  Lessons on neuroimaging analysis with Python
  ☆22Updated 8 years ago
• chrisgorgo / alleninf
  Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
  ☆32Updated 7 years ago
• nipy / nitransforms
  a standalone fork of nipy/nibabel#656
  ☆35Updated 3 weeks ago
• sensein / mapalign
  Diffusion map based embedding and alignment
  ☆68Updated 3 years ago
• WhitakerLab / scona
  Code to analyse structural covariance brain networks using python.
  ☆73Updated 2 years ago
• berenslab / mini-atlas
  Phenotypic variation of transcriptomic cell types in mouse motor cortex
  ☆26Updated 4 years ago
• ethanbahl / cerebroViz
  ☆25Updated 3 years ago
• pyhrf / pyhrf
  PyHRF is a set of tools to analyze fMRI data and specifically study hemodynamics.
  ☆29Updated 7 years ago
• WarrenWeckesser / heatmapcluster
  A python library for generating a clustered heatmap with dendrograms.
  ☆34Updated 3 years ago
• TIGRLab / datman
  scripts for managing xnat, QC, and data analysis
  ☆17Updated 3 weeks ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆108Updated 6 years ago
• datalad / datalad-neuroimaging
  DataLad extension for neuroimaging research
  ☆19Updated 7 months ago
• quantixed / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆109Updated 5 months ago
• kristinbranson / BABAM
  The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…
  ☆13Updated 2 years ago
• jaydevine / MusMorph
  MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.
  ☆11Updated last year