cognoma / figshare
A package for downloading and uploading figshare data
☆23Updated last year
Alternatives and similar repositories for figshare:
Users that are interested in figshare are comparing it to the libraries listed below
- Spatial Transcriptomics Dashboard☆28Updated last year
- ☆16Updated last year
- A Python package for gene network analysis☆32Updated 2 years ago
- Bam to Pandas DataFrame, quickly☆13Updated 5 months ago
- MultiMAP for integration of single cell multi-omics☆54Updated last year
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- A spatial genome aligner for analyzing multiplexed DNA-FISH imaging data.☆18Updated last year
- Repository for storing prototype functionality implementations for the BKP☆22Updated 2 weeks ago
- SIP: Significant Interaction Peak caller☆14Updated 7 months ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated last year
- ☆12Updated last year
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆27Updated this week
- Fit generalized linear models in python.☆27Updated last year
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆20Updated last year
- Dynamical systems methods for RNA velocity analysis☆24Updated 3 years ago
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Updated 9 years ago
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆26Updated 4 years ago
- Python client for the OmniPath web service☆43Updated 8 months ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- Single Cell Consensus Clustering with Speed☆20Updated 2 years ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆70Updated 7 months ago
- ☆21Updated 4 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆31Updated this week
- Single cell interactive plotting tools☆23Updated 4 years ago
- SpatialCorr: Identify gene sets with spatially varying correlation☆15Updated last year
- Spatial analysis toolkit for single cell multiplexed tissue data☆30Updated 5 months ago
- Legend made easy for matplotlib☆23Updated 2 weeks ago
- ☆41Updated last week
- The Vizgen Post-processing Tool (VPT) enables users to reprocess and refine the single-cell results of MERSCOPE experiments.☆25Updated 4 months ago
- Create PyTorch Datasets from AnnData☆20Updated 4 months ago