A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
☆26Oct 13, 2016Updated 9 years ago
Alternatives and similar repositories for reproducibility-via-singularity
Users that are interested in reproducibility-via-singularity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- official build specifications for jupyter☆13Jun 3, 2021Updated 5 years ago
- Instructions for contributing the to free and open source materials for teaching foundational computational and data science skills to re…☆12Mar 28, 2022Updated 4 years ago
- A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models☆14May 19, 2026Updated 4 months ago
- The mildly ominous parameter exploration toolkit 🛵 - Run huge simulations on distributed clusters, because why not? 🤯☆14Feb 16, 2021Updated 5 years ago
- BluePyEfe: Blue Brain Python E-feature extraction☆17Feb 26, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Package for fitting/optimization of NeuroML models☆18Jul 21, 2026Updated 2 months ago
- The Blue Brain Pythonic Simulation and Network Analysis Productivity layer☆21Feb 26, 2025Updated last year
- Bioinformatics for the Scala programming language☆115Aug 24, 2025Updated last year
- hanythingondemand provides a set of scripts to easily set up an ad-hoc Hadoop cluster through PBS jobs☆12Jul 2, 2019Updated 7 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- Python Bindings for Neuroshare☆16Aug 16, 2016Updated 10 years ago
- Module 9: Introduction to the DPLYR Package☆11Jan 26, 2017Updated 9 years ago
- A collection of easyconfig files that describe which software to build using which build options with EasyBuild.☆20Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Sep 17, 2019Updated 7 years ago
- Visualization methods for omics dataset quality control☆11Jun 24, 2026Updated 3 months ago
- Script and pipeline for BRAINcode project☆17Aug 28, 2026Updated 3 weeks ago
- Collection of Singularity build files and scripts to create them for popular Linux Distributions☆10Jun 23, 2022Updated 4 years ago
- Jupyter Notebooks to be used with Advanced Analytics Workspace platform☆13Jul 14, 2023Updated 3 years ago
- A workflow for construction of Gene Expression count Matrices (GEMs). Useful for Differential Gene Expression (DGE) analysis and Gene Co-…☆37Nov 25, 2024Updated last year
- Code related to my critique of the Tsai et al 2017 papers on anti-aliasing☆21Feb 11, 2020Updated 6 years ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 5 months ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆13Feb 16, 2019Updated 7 years ago
- C++ basecode and python scripting interface☆20Mar 20, 2025Updated last year
- Benchmark of online PCA algorithms☆22Sep 18, 2018Updated 8 years ago
- 'Open to Discussion' is a project aimed at igniting conversations about open science.☆13May 10, 2018Updated 8 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆25Apr 21, 2021Updated 5 years ago
- LOFAR solutions tool☆12Apr 29, 2026Updated 4 months ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆11Sep 17, 2020Updated 6 years ago
- (WIP!) An easy way to build the perfect Code of Conduct for your event/community/organisation☆14Oct 30, 2018Updated 7 years ago
- ☆10Apr 17, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 5 months ago
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated 11 months ago
- ☆12Jul 7, 2022Updated 4 years ago
- Planning OpenCon Openly☆11Jan 31, 2018Updated 8 years ago
- Setup your win-only applications on linux☆12May 31, 2020Updated 6 years ago
- Schedule and resources from the OHBM Open Science Room: Rome 2019☆16Jun 25, 2019Updated 7 years ago