eWaterCycle / setup-apptainerLinks
GitHub action to setup apptainer
☆16Updated last year
Alternatives and similar repositories for setup-apptainer
Users that are interested in setup-apptainer are comparing it to the libraries listed below
Sorting:
- An example GitHub Action (CI) to build a Singularity container☆71Updated 2 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated 2 years ago
- GitHub action to setup singularity☆18Updated 2 years ago
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆26Updated 4 years ago
- Tabular seff☆90Updated this week
- ☆68Updated last year
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆47Updated last week
- A Python class for scheduling SLURM jobs☆60Updated last year
- Simple installer for conda (and conda-likes)☆17Updated last week
- The R package manager that is blazingly fast ⚡. Powered by mamba.☆78Updated 3 years ago
- Nextflow plugin implementation skeleton☆11Updated 5 months ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Updated last month
- HPC Python lesson materials☆61Updated 3 years ago
- python wrapper to submit jobs to bsub (and later qsub)☆44Updated 4 years ago
- Misc. utilities☆11Updated 6 years ago
- Apptainer in Docker!☆55Updated 2 months ago
- A repository to practice contributing to a Manubot manuscript☆48Updated 8 months ago
- ☆17Updated 2 years ago
- A tool for creating resource prediction models for scientific workflows☆13Updated last year
- Should you cite this software?☆33Updated 5 years ago
- Python utilities for CWL☆42Updated 3 weeks ago
- A TUI for monitoring Snakemake workflows in real-time.☆50Updated last month
- submit jobs to slurm with quick-and-dirty python☆95Updated 3 years ago
- Analyzes whole genome sequencing data for gene-editing verification☆10Updated this week
- A small python library to adjust and annotate axis ticklabels in plots.☆52Updated 6 months ago
- a full day lesson material to teach the basics of using a HPC cluster to novices☆36Updated 6 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆11Updated 2 years ago
- Build and maintain multiple custom conda environments all in one place.☆40Updated last year
- Collection of National Science Foundation (NSF) proposal templates: pitches, general applications, etc.☆16Updated 2 years ago
- A Github action for running a Snakemake workflow☆62Updated last month