Alternatives and similar repositories for setup-apptainer

Users that are interested in setup-apptainer are comparing it to the libraries listed below

• singularityhub / github-ci
  An example GitHub Action (CI) to build a Singularity container
  ☆70Updated 2 years ago
• eWaterCycle / setup-singularity
  GitHub action to setup singularity
  ☆17Updated 2 years ago
• singularityhub / singularity-deploy
  Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
  ☆17Updated last year
• GreenAlgorithms / GreenAlgorithms4HPC
  ☆65Updated 9 months ago
• sbmlteam / python-libsbml
  Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.
  ☆23Updated last month
• hpc-carpentry / hpc-python
  HPC Python lesson materials
  ☆61Updated 2 years ago
• jupyter-widgets-contrib / ipyigv
  A Jupyter wrapper for the igv.js library (representation of genomic data)
  ☆26Updated 4 years ago
• citation-file-format / doi2cff
  Generate a CFF file using the metadata from a software release on Zenodo.
  ☆22Updated 2 years ago
• snakemake / snakemake-executor-plugin-slurm
  A Snakemake executor plugin for submitting jobs to a SLURM cluster
  ☆36Updated this week
• matthiaskoenig / cy3sbml
  cy3sbml: SBML for Cytoscape 3
  ☆14Updated this week
• nextflow-io / nf-hello
  Nextflow plugin implementation skeleton
  ☆10Updated last month
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆58Updated last week
• Snakemake-Profiles / pbs-torque
  ☆16Updated last year
• msbentsen / plotannot
  A small python library to adjust and annotate axis ticklabels in plots.
  ☆52Updated 3 years ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• lanl / PyBNF
  An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…
  ☆24Updated last year
• troycomi / reportseff
  Tabular seff
  ☆83Updated last week
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆39Updated last week
• aolney / nsf-coa
  Generate NSF Collaborators and Other Affiliations Information from your publications
  ☆27Updated 4 years ago
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated 2 years ago
• sapporo-wes / tonkaz
  CLI tool to verify workflow reproducibility
  ☆16Updated last year
• phiweger / nanotext
  Proteins as words, genomes as documents.
  ☆20Updated 4 years ago
• psteinb / hpc-in-a-day
  a full day lesson material to teach the basics of using a HPC cluster to novices
  ☆34Updated 6 years ago
• kaczmarj / apptainer-in-docker
  Apptainer in Docker!
  ☆50Updated 6 months ago
• matthiaskoenig / dfba
  Encoding Dynamic Flux Balance Analysis in SBML
  ☆12Updated 4 years ago
• dpryan79 / Misc
  Misc. utilities
  ☆11Updated 6 years ago
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆38Updated 6 months ago
• uschpc / slurm-tools
  Slurm CLI tools used on CARC HPC clusters
  ☆12Updated 3 weeks ago
• camilogarciabotero / biocomp-book
  A repo hosting the combined lectures of a course on Fundamentals of Computational Biology
  ☆15Updated last year
• ntjess / typst-nsf-templates
  Collection of National Science Foundation (NSF) proposal templates: pitches, general applications, etc.
  ☆13Updated last year