MaayanLab / FAIRshakeLinks
☆10Updated 7 months ago
Alternatives and similar repositories for FAIRshake
Users that are interested in FAIRshake are comparing it to the libraries listed below
Sorting:
- FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.☆12Updated 3 months ago
- biotoolsSchema : Tool description data model for computational tools in life sciences☆38Updated last year
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Updated 9 years ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆23Updated 3 years ago
- The Gene Ontology Helpdesk☆16Updated 3 months ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Updated 4 years ago
- Big Data Bag Utilities☆49Updated 3 weeks ago
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆15Updated 2 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Updated 2 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Updated 3 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 8 months ago
- SODAR: System for Omics Data Access and Retrieval☆15Updated last week
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Updated 6 years ago
- Managing metadata and policy around metadata in NMDC☆2Updated last year
- Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:☆17Updated 10 months ago
- Registration of Galaxy Tools in Elixir☆12Updated 6 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 7 years ago
- Distinguishing between generic and experiment-specific gene expression signals.☆12Updated 2 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 7 months ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated 4 months ago
- Python parser for ISAtab, a biological file format for experimental metadata☆16Updated 8 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆24Updated 9 months ago
- A metadata commons to store research software metadata☆41Updated this week
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Updated 3 years ago
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Updated 4 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- Semantic data model of the set of common data elements for rare disease registration☆12Updated last year
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆18Updated this week
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago