dohalloran / PrimerView
high-throughput primer design and graphical visualization
☆9Updated 7 years ago
Alternatives and similar repositories for PrimerView
Users that are interested in PrimerView are comparing it to the libraries listed below
Sorting:
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated last year
- Genomic Assemblies Merger for NGS☆26Updated last year
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- ☆15Updated 7 years ago
- Documentation for analyzing SARS-Cov2 samples.☆11Updated 4 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 4 months ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated 2 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 8 years ago
- Read nanopore sequence reads in real-time☆14Updated 8 years ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Updated 8 years ago
- Find Unique genomic Regions☆29Updated last month
- Visualising discordant reads☆15Updated 9 years ago
- TreeBeST: Tree Building guided by Species Tree☆14Updated 14 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- ☆19Updated 8 years ago
- Assembly by Reduced Complexity (ARC)☆41Updated 9 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 4 years ago
- Bioinformatics pipeline for nanopore sequencing data☆11Updated 6 years ago
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Updated 4 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Updated 5 months ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Updated 9 years ago
- Convert genbank files to a swath of other formats☆18Updated last year
- ☆12Updated 2 months ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago