UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RAP).
☆38Apr 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for UKB-RAP-Notebooks-Genomics
Users that are interested in UKB-RAP-Notebooks-Genomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package that contains plink binaries for windows, mac and linux☆15Oct 14, 2019Updated 6 years ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆170Feb 19, 2026Updated 2 months ago
- This repo contains a JupyterLab notebook allowing individual SNPs to be filtered from the UKB genotyping data. A few approaches to filter…☆24Jul 18, 2025Updated 9 months ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆257Jul 30, 2024Updated last year
- RA Synovial Single-cell Multimodal Cell Atlas☆21Mar 6, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A demo/example pipeline for analysing wearables data using the RAP.☆20Jul 11, 2024Updated last year
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆24Jun 20, 2024Updated last year
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 6 months ago
- An R package with toolkits for tong's friends☆11Mar 18, 2025Updated last year
- Supports epidemiological analyses using compositional exposure variables☆10Oct 10, 2025Updated 6 months ago
- This is my index list repo for my CS course projects of SUSTech. Current: CS103, CS106, CS109, CS201, CS202, CS205, CS207, CS304, CS305, …☆17Jun 27, 2025Updated 10 months ago
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- high-performance BED-to-GTF converter written in Rust☆20Mar 19, 2026Updated last month
- The advanced implementation for BioChatter, using Next.js☆18Jan 17, 2025Updated last year
- ☆103Jan 21, 2026Updated 3 months ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆55Mar 27, 2026Updated last month
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- Collection of machine learning models for predicting toxicity of molecules☆12May 6, 2020Updated 5 years ago
- ☆21Aug 20, 2024Updated last year
- Image-based Profiling Handbook☆11Apr 15, 2025Updated last year
- LLM-Powered Data Discovery System for Tabular Data☆28Apr 7, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A convolutional neural network predicts the toxicity of a drug based on its molecular structure.☆16Mar 27, 2019Updated 7 years ago
- Gateway to Aging: Spousal Concordance☆10Jun 9, 2023Updated 2 years ago
- Quality control steps for GWAS☆26Aug 11, 2023Updated 2 years ago
- Package for genetic network analysis of GWAS summary statistics☆17Aug 24, 2025Updated 8 months ago
- Effects of Adherence to Mediterranean and MIND Diets, and the Mediating Effect of Metabolites on Risks of Overall and 22 Specific Cancers…☆14Apr 10, 2024Updated 2 years ago
- An R-Package to Simulate Data from a (Time-Dependent) Causal DAG☆18Apr 17, 2026Updated 2 weeks ago
- ☆14Jun 24, 2024Updated last year
- Clean and identify errors in GWAS summary statistics☆18Feb 12, 2026Updated 2 months ago
- Cross-protein transfer learning for variant effect prediction☆20Sep 13, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆18Mar 26, 2026Updated last month
- Drug discovery project by making use of the Tox-21 dataset.☆22Apr 27, 2023Updated 3 years ago
- GWAS Tutorial for Beginners☆411Apr 17, 2026Updated 2 weeks ago
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆14Jun 10, 2022Updated 3 years ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- A set of general tools.☆17Mar 28, 2026Updated last month
- ☆12Jan 9, 2023Updated 3 years ago