spiros / phemapLinks
Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records
☆37Updated 2 years ago
Alternatives and similar repositories for phemap
Users that are interested in phemap are comparing it to the libraries listed below
Sorting:
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆26Updated 3 years ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆26Updated 4 years ago
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆53Updated 2 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆36Updated 4 years ago
- Prepare UK Biobank Electronic Health Record data for research☆29Updated 2 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆62Updated 2 years ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29Updated 4 years ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆40Updated 4 years ago
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆49Updated last year
- ETL UK-Biobank☆15Updated 2 years ago
- Workbench demo project: cross-analysis of AoU and UKB.☆13Updated 2 years ago
- An R package to manipulate and explore UK Biobank data☆106Updated 2 years ago
- Pipeline for processing UK biobank data☆17Updated 4 years ago
- R package to streamline use of the AllofUs researcher workbench☆17Updated 3 months ago
- https://celehs.github.io/PheCAP/☆21Updated 4 years ago
- MASI Lab Implementation of PheWAS in Python☆28Updated 9 months ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆38Updated last week
- R package for UK Biobank data wrangling.☆21Updated last year
- The PheWAS R package☆143Updated 4 months ago
- Generate safety signal statistics from FDA FAERS data☆50Updated last year
- HDR UK National Phenotype Library☆22Updated 2 years ago
- AutoScore: An Interpretable Machine Learning-Based Automatic Clinical Score Generator☆33Updated last month
- ☆33Updated 7 months ago
- ☆29Updated 7 years ago
- R package with netDx software and data for examples☆12Updated 2 years ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆19Updated last year
- Helper functions for UK Biobank data☆12Updated 3 years ago
- geneSurv: an interactive web-based tool for survival analysis in genomics research☆17Updated 5 years ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆21Updated 11 months ago