spiros / ukbiobank-resourcesLinks
A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.
☆58Updated 2 years ago
Alternatives and similar repositories for ukbiobank-resources
Users that are interested in ukbiobank-resources are comparing it to the libraries listed below
Sorting:
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆38Updated 2 months ago
- An R package to manipulate and explore UK Biobank data☆109Updated 2 years ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆43Updated 4 years ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆27Updated 3 years ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆26Updated 4 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆52Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆156Updated 3 months ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆34Updated 2 years ago
- ☆33Updated last year
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆143Updated last week
- Tofu is a Python tool for generating synthetic UK Biobank data.☆67Updated 2 years ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆19Updated 3 years ago
- ☆49Updated 11 months ago
- ☆101Updated last week
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆226Updated last year
- R package for UK Biobank data wrangling.☆21Updated last year
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆22Updated last year
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Updated 3 years ago
- A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).☆25Updated 7 years ago
- ☆24Updated 4 months ago
- Bayesian multi-response Mendelian randomisation☆21Updated 9 months ago
- ☆46Updated last year
- The PheWAS R package☆151Updated 3 months ago
- Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…☆13Updated 5 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago
- ☆22Updated 2 years ago
- ☆51Updated 6 months ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆32Updated last year
- Examples on using EpiGraphDB☆28Updated 4 years ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆20Updated 4 years ago