A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.
☆63Mar 31, 2023Updated 3 years ago
Alternatives and similar repositories for ukbiobank-resources
Users that are interested in ukbiobank-resources are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).☆28Oct 12, 2018Updated 7 years ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆44Jul 12, 2021Updated 5 years ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆34Feb 19, 2021Updated 5 years ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆73Jul 25, 2023Updated 3 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆21Feb 26, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Multi-modality brain-age analysis in the UK Biobank☆13Mar 4, 2020Updated 6 years ago
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆14Jun 10, 2022Updated 4 years ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆27Apr 7, 2022Updated 4 years ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆26Jun 20, 2024Updated 2 years ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 3 months ago
- An R package to manipulate and explore UK Biobank data☆111Feb 22, 2023Updated 3 years ago
- Python for UK Biobank data analysis☆10Dec 3, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The UKB RAP Imaging and Machine Learning repository contains examples and tools to assist users of the UK Biobank Research Analyses Platf…☆18Dec 16, 2025Updated 8 months ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆16Aug 14, 2020Updated 6 years ago
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated 11 months ago
- Prepare UK Biobank Electronic Health Record data for research☆32Aug 31, 2022Updated 3 years ago
- Dementia (Alzheimer's Disease) Risk Prediction Tool based on UK Biobank☆27Dec 30, 2024Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆167Oct 22, 2025Updated 9 months ago
- Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…☆13May 11, 2020Updated 6 years ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆173Feb 19, 2026Updated 5 months ago
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆66Jul 7, 2026Updated last month
- UKB Weekend Warrior MVPA Analysis☆13Apr 28, 2025Updated last year
- Stata package for two-sample Mendelian randomization analyses using summary data☆25Jul 9, 2026Updated last month
- A new extended cell deconvolution for peripheral blood☆19Feb 28, 2025Updated last year
- Notes and code for running UK Biobank GWAS at the MRC IEU☆19Jul 18, 2024Updated 2 years ago
- Genomic sequence preprocessing toolkit☆14Jul 27, 2026Updated 3 weeks ago
- Outcomes Insights' Data Model for Clinical Research☆21Jul 6, 2026Updated last month
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- ADNI resting-state fMRI analysis scripts☆14Jul 30, 2015Updated 11 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Download UKB bulk data☆12Jul 27, 2020Updated 6 years ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆19Dec 22, 2022Updated 3 years ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆78Jan 12, 2026Updated 7 months ago
- The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis☆12Apr 19, 2023Updated 3 years ago
- Covid-19 HGI WES/WGS burden test BQC-19 pipeline☆16May 26, 2022Updated 4 years ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆93Mar 13, 2026Updated 5 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆22Jul 4, 2022Updated 4 years ago