Alternatives and similar repositories for ukbiobank-resources:

Users that are interested in ukbiobank-resources are comparing it to the libraries listed below

• nadavbra / ukbb_parser
  A Python module for loading phenotypic and genetic data from the UK Biobank.
  ☆35Updated 3 years ago
• saphir746 / BiobankRead-Bash
  Python scripts to extract and pre-process UKB data
  ☆31Updated 5 years ago
• sritchie73 / ukbnmr
  Tools for processing Nightingale NMR biomarker data in UK Biobank
  ☆34Updated 4 months ago
• spiros / ukb-biomarker-phenotypes
  Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank
  ☆24Updated 4 years ago
• PhilAppleby / ukbb-srmed
  Text matching UK Biobank Self-Reported medication descriptions for medication classification
  ☆23Updated 2 years ago
• umich-cphds / createUKBphenome
  Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank
  ☆26Updated last year
• UK-Biobank / UKB-RAP-Notebooks-Access
  UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).
  ☆87Updated last month
• hakyimlab / ukbrest
  ukbREST: efficient and streamlined data access for reproducible research of large biobanks
  ☆38Updated 3 years ago
• yeyixuan / UKBCaseFinder
  A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).
  ☆20Updated 6 years ago
• alicerosecarter / MediationMR
  Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…
  ☆12Updated 4 years ago
• kenhanscombe / ukbtools
  An R package to manipulate and explore UK Biobank data
  ☆102Updated 2 years ago
• genomics-dev / ukb-pret
  ☆28Updated 2 months ago
• NightingaleHealth / ukb-nightingale-biomarker-atlas
  Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".
  ☆13Updated 2 years ago
• HaloForest / UKB_PWAS
  Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…
  ☆10Updated 2 years ago
• niekverw / ukbpheno
  ☆31Updated 5 months ago
• rmgpanw / ukbwranglr
  R package for UK Biobank data wrangling.
  ☆19Updated 11 months ago
• MRCIEU / PHESANT
  PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
  ☆146Updated 10 months ago
• huw-morris-lab / ukbiobank
  Pipeline for processing UK biobank data
  ☆13Updated 4 years ago
• dnanexus-rnd / liftover_plink_beds
  Converting UK Biobank genome-wide genotyping data from one reference build to another
  ☆17Updated 9 months ago
• bjcairns / ukbschemas
  Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi
  ☆20Updated 4 years ago
• jasonHKU0907 / DementiaProteomicPrediction
  ☆40Updated 2 months ago
• lb664 / MR2
  Bayesian multi-response Mendelian randomisation
  ☆16Updated this week
• philipdarke / ukbbhelpr
  Helper functions for UK Biobank data
  ☆12Updated 3 years ago
• DanniGadd / Blood_protein_levels_and_incident_disease_UK_Biobank
  ☆16Updated last year
• dnanexus / OpenBio
  ☆73Updated last year
• philipdarke / ukbb-ehr-data
  Prepare UK Biobank Electronic Health Record data for research
  ☆26Updated 2 years ago
• dnanexus / UKB_RAP
  Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…
  ☆159Updated 8 months ago
• BIG-S2 / GWAS
  GWAS Summary Statistics for Brain Imaging Phenotypes
  ☆20Updated 3 years ago
• comp-med / sparse-proteomic-prediction-of-common-and-rare-diseases
  This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…
  ☆16Updated 9 months ago
• spiros / phemap
  Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records
  ☆34Updated 2 years ago