A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.
☆59Mar 31, 2023Updated 2 years ago
Alternatives and similar repositories for ukbiobank-resources
Users that are interested in ukbiobank-resources are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).☆27Oct 12, 2018Updated 7 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 4 months ago
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆43Jul 12, 2021Updated 4 years ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆68Jul 25, 2023Updated 2 years ago
- Multi-modality brain-age analysis in the UK Biobank☆12Mar 4, 2020Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆21Feb 26, 2021Updated 5 years ago
- Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records☆39Dec 27, 2022Updated 3 years ago
- Helper functions for UK Biobank data☆13Dec 6, 2021Updated 4 years ago
- Text matching UK Biobank Self-Reported medication descriptions for medication classification☆27Apr 7, 2022Updated 3 years ago
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆13Jun 10, 2022Updated 3 years ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆23Jun 20, 2024Updated last year
- An R package to manipulate and explore UK Biobank data☆109Feb 22, 2023Updated 3 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆34Sep 28, 2023Updated 2 years ago
- R package for UK Biobank data wrangling.☆21Apr 26, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated 6 months ago
- Python for UK Biobank data analysis☆10Dec 3, 2024Updated last year
- Dementia (Alzheimer's Disease) Risk Prediction Tool based on UK Biobank☆27Dec 30, 2024Updated last year
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Mar 2, 2026Updated 3 weeks ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆160Oct 22, 2025Updated 5 months ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆382Jun 7, 2023Updated 2 years ago
- UKB Weekend Warrior MVPA Analysis☆12Apr 28, 2025Updated 11 months ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 6 months ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆16Aug 14, 2020Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆159Feb 19, 2026Updated last month
- Stata package for two-sample Mendelian randomization analyses using summary data☆24Oct 12, 2025Updated 5 months ago
- Notes and code for running UK Biobank GWAS at the MRC IEU☆18Jul 18, 2024Updated last year
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 2 months ago
- A new extended cell deconvolution for peripheral blood☆18Feb 28, 2025Updated last year
- Outcomes Insights' Data Model for Clinical Research☆19Feb 26, 2026Updated last month
- ADNI resting-state fMRI analysis scripts☆14Jul 30, 2015Updated 10 years ago
- ☆48Jul 31, 2024Updated last year
- Effect of tokenization on transformers for biological sequence☆22Dec 31, 2025Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆76Jan 12, 2026Updated 2 months ago
- The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis☆12Apr 19, 2023Updated 2 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 4 years ago
- Codebase for "AutoPrognosis: Automated Clinical Prognostic Modeling via Bayesian Optimization", ICML 2018.☆55Jan 20, 2021Updated 5 years ago
- ARCH i2b2 PCORnet Ontology☆14May 1, 2019Updated 6 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆22Jul 4, 2022Updated 3 years ago
- ☆50Feb 2, 2025Updated last year