Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
☆259Jul 30, 2024Updated last year
Alternatives and similar repositories for UKB_RAP
Users that are interested in UKB_RAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆171Feb 19, 2026Updated 5 months ago
- ☆103Jan 21, 2026Updated 6 months ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆78Jan 12, 2026Updated 6 months ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆26Jun 20, 2024Updated 2 years ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆39Apr 15, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆92Mar 13, 2026Updated 4 months ago
- Helper functions for UK Biobank data☆13Dec 6, 2021Updated 4 years ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆34Feb 19, 2021Updated 5 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆66Jul 7, 2026Updated 2 weeks ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 2 months ago
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated 10 months ago
- Prepare UK Biobank Electronic Health Record data for research☆32Aug 31, 2022Updated 3 years ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- ☆51Feb 2, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆63Mar 31, 2023Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆19Sep 30, 2022Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆57Apr 8, 2024Updated 2 years ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆16Aug 14, 2020Updated 5 years ago
- The UKB RAP Imaging and Machine Learning repository contains examples and tools to assist users of the UK Biobank Research Analyses Platf…☆18Dec 16, 2025Updated 7 months ago
- This repo contains a JupyterLab notebook allowing individual SNPs to be filtered from the UKB genotyping data. A few approaches to filter…☆24Jul 18, 2025Updated last year
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 8 months ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆73Jul 25, 2023Updated 2 years ago
- A pipeline for phasing UK Biobank whole genome sequence data☆19Mar 21, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 2 months ago
- ☆14Dec 2, 2022Updated 3 years ago
- A demo/example pipeline for analysing wearables data using the RAP.☆20Jul 11, 2024Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆301Jul 7, 2026Updated 2 weeks ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆167Oct 22, 2025Updated 8 months ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆392Jun 7, 2023Updated 3 years ago
- An R package to manipulate and explore UK Biobank data☆111Feb 22, 2023Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆67Oct 22, 2025Updated 8 months ago
- A tool to plot significant regions of GWAS☆30Jan 27, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Notes and code for running UK Biobank GWAS at the MRC IEU☆19Jul 18, 2024Updated 2 years ago
- Downstream analysis for the paper "Metabolomic profiles predict individual multi-disease outcomes in the UK Biobank cohort".☆15Jul 14, 2026Updated last week
- ukbREST: efficient and streamlined data access for reproducible research of large biobanks☆44Jul 12, 2021Updated 5 years ago
- ☆48Jul 31, 2024Updated last year
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆35Jan 28, 2026Updated 5 months ago
- Repo for the R package coloc☆201Dec 4, 2025Updated 7 months ago
- GWAS Tutorial for Beginners☆447Jun 2, 2026Updated last month