Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
☆259Jul 30, 2024Updated 2 years ago
Alternatives and similar repositories for UKB_RAP
Users that are interested in UKB_RAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆173Feb 19, 2026Updated 8 months ago
- ☆103Jan 21, 2026Updated 9 months ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆78Jan 12, 2026Updated 9 months ago
- Converting UK Biobank genome-wide genotyping data from one reference build to another☆26Jun 20, 2024Updated 2 years ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆40Apr 15, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆66Jul 7, 2026Updated 3 months ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆95Mar 13, 2026Updated 7 months ago
- Helper functions for UK Biobank data☆13Dec 6, 2021Updated 4 years ago
- Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank☆34Feb 19, 2021Updated 5 years ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 6 months ago
- The UKB RAP Imaging and Machine Learning repository contains examples and tools to assist users of the UK Biobank Research Analyses Platf…☆18Dec 16, 2025Updated 10 months ago
- ☆11Mar 29, 2022Updated 4 years ago
- Prepare UK Biobank Electronic Health Record data for research☆32Aug 31, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆63Mar 31, 2023Updated 3 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆168Oct 22, 2025Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- Prepare electronic medical record data from the UK Biobank for time-to-event analyses☆16Sep 10, 2025Updated last year
- An R package to manipulate and explore UK Biobank data☆112Feb 22, 2023Updated 3 years ago
- This repo contains a JupyterLab notebook allowing individual SNPs to be filtered from the UKB genotyping data. A few approaches to filter…☆24Jul 18, 2025Updated last year
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 6 months ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆41Nov 3, 2025Updated 11 months ago
- SCALLOP-INF analysis☆21Jul 7, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆14Dec 2, 2022Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆19Sep 30, 2022Updated 4 years ago
- Proteomic profiling of incident cardiac diseases in the UKB-PPP☆14Oct 16, 2024Updated 2 years ago
- Repo for the R package coloc☆213Updated this week
- Tofu is a Python tool for generating synthetic UK Biobank data.☆73Jul 25, 2023Updated 3 years ago
- ☆51Feb 2, 2025Updated last year
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆395Jun 7, 2023Updated 3 years ago
- Generating polygenic risk scores in UK Biobank (University of Bristol)☆16Aug 14, 2020Updated 6 years ago
- GENI plots to visualise results from genome-wide association studies☆34Oct 14, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆312Sep 25, 2026Updated last month
- ☆35Jan 23, 2025Updated last year
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆76Apr 26, 2026Updated 6 months ago
- ☆48Sep 15, 2026Updated last month
- Notes and code for running UK Biobank GWAS at the MRC IEU☆19Jul 18, 2024Updated 2 years ago
- ☆58Sep 28, 2026Updated last month
- DNAnexus platform client libraries☆111Updated this week