xuyu-cam / atlas_genetic_scores_omic_traitsLinks
This repository houses scripts for training genetic scores of omic traits in INTERVAL
☆26Updated 2 years ago
Alternatives and similar repositories for atlas_genetic_scores_omic_traits
Users that are interested in atlas_genetic_scores_omic_traits are comparing it to the libraries listed below
Sorting:
- GREP: Genome for REPositioning drugs☆43Updated 2 years ago
- ☆17Updated 5 years ago
- Homologous recombination deficiency in TCGA PanCancer Atlas☆28Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆114Updated 3 months ago
- Multiscale embedded gene co-expression network analysis☆55Updated last year
- Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-se…☆18Updated 10 months ago
- Cross-population polygenic prediction☆90Updated 10 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Source code of FUMA GWAS web application☆58Updated last year
- Bayesian network plot for the enrichment analysis results☆65Updated last year
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆35Updated 3 years ago
- ☆32Updated 3 years ago
- ☆50Updated this week
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 5 years ago
- ☆59Updated 3 years ago
- ☆20Updated 4 years ago
- Genome-wide association studies tutorial 🧬☆49Updated 5 years ago
- Repository for Cibersortx☆60Updated 4 years ago
- Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie…☆27Updated 2 years ago
- ☆47Updated 9 months ago
- a fully Bayesian approach to deconvolve tumor microenvironment☆60Updated 3 years ago
- ☆24Updated 2 weeks ago
- A novel unsupervised batch removal framework, called iMAP, based on neural networks.☆35Updated 3 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆43Updated 3 years ago
- ☆82Updated 2 months ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Identifying tumor cells at the single-cell level using machine learning☆49Updated 11 months ago
- Relative Expression Ordering Analysis (REOA) package☆21Updated 2 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 9 months ago