Alternatives and similar repositories for TwoStepCisMR:

Users that are interested in TwoStepCisMR are comparing it to the libraries listed below

• catherinestorm / mr_druggable_genome_pd
  ☆22Updated 2 years ago
• mglev1n / mrSampleOverlap
  Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies
  ☆11Updated 2 years ago
• jinghuazhao / pQTLtools
  pQTL tools
  ☆18Updated this week
• LizaDarrous / PheWAS-cluster
  ☆19Updated 4 months ago
• cumc / pecotmr
  Pair-wise enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆20Updated this week
• explodecomputer / plinkbinr
  R package that contains plink binaries for windows, mac and linux
  ☆9Updated 5 years ago
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆14Updated 3 years ago
• MRCIEU / gwasglue2
  Connecting GWAS summary data to analytical tools
  ☆21Updated 9 months ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆26Updated 3 months ago
• LizaDarrous / lhcMR
  lhcMR
  ☆24Updated 9 months ago
• gqi / MRMix
  R package for performing Mendelian Randomization using mixture models
  ☆24Updated 4 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆38Updated 8 months ago
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆37Updated 9 months ago
• globalbiobankmeta / multi-ancestry-pwmr
  Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper
  ☆17Updated last year
• adriaan-vd-graaf / mrlink2
  MR-link 2 is a summary statistics _cis_ MR method that is pleiotropy robust.
  ☆13Updated last month
• segrelabgenomics / TwoSampleMR_pipeline
  Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.
  ☆25Updated last year
• kn3in / mRnd
  Power calculations for Mendelian Randomisation
  ☆22Updated 7 years ago
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆30Updated 4 months ago
• eleanorsanderson / MediationMR
  ☆22Updated 4 years ago
• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆31Updated 2 years ago
• RitchieLab / Gene-level-statistical-colocalization
  ☆14Updated 3 years ago
• amymariemason / SUMnlmr
  non-linear MR for semi-summarized data
  ☆23Updated 7 months ago
• mglev1n / ldscr
  LD Score Regression in R
  ☆39Updated last year
• jinghuazhao / EWAS-fusion
  Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)
  ☆12Updated last year
• hailianghuang / FM-summary
  Fine-mapping method only using summary statistics
  ☆18Updated 8 years ago
• WenjianBI / SPACox
  GWAS for survival analysis in large cohorts
  ☆21Updated 5 months ago
• opain / Predicting-TWAS-features
  Tool for predicting TWAS features (e.g. gene expression) in a target sample
  ☆15Updated last month
• fernandam93 / epiclocks_cancer
  This code relates to the project titled "Assessing the causal role of epigenetic clocks in the development of multiple cancers: a Mendeli…
  ☆13Updated 3 years ago
• JonSulc / PolyMR
  Polynomial Mendelian randomization for the inference of non-linear causal effects
  ☆13Updated last year
• alhenry / cvd1-hf
  Analysis code for Olink CVD1 - HF analysis
  ☆12Updated 5 months ago