dceoy / docker-bioLinks
Dockerfile repository for Bioinformatics
☆35Updated last year
Alternatives and similar repositories for docker-bio
Users that are interested in docker-bio are comparing it to the libraries listed below
Sorting:
- List of IARC bioinformatics pipelines and resources☆51Updated 3 weeks ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 5 months ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆88Updated 9 months ago
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- Script to convert GTC/BPM files to VCF☆47Updated 11 months ago
- Powerful statistics for VCF files☆70Updated 3 weeks ago
- ☆69Updated 3 years ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- Precision HLA typing from next-generation sequencing data☆70Updated last week
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- BISulfite-seq CUI Toolkit☆65Updated 6 months ago
- Documenting usage and experience with bioinformatic tools☆40Updated 9 years ago
- ☆78Updated 11 years ago
- A python parser to simplify and build the VCF (Variant Call Format).☆49Updated 9 months ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Updated 5 years ago
- BigWig and BAM utilities☆97Updated last year
- QDNAseq package for Bioconductor☆50Updated last year
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆35Updated 8 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- ⛏ HLA predictions from NGS shotgun data☆54Updated 2 months ago
- Maximum likelihood demultiplexing☆47Updated 5 months ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆142Updated 2 months ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆56Updated 5 years ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆92Updated 4 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 5 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago