Alternatives and similar repositories for IGI-DL:

Users that are interested in IGI-DL are comparing it to the libraries listed below

• fuscc-deep-path / sc_MTOP
  sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…
  ☆29Updated 4 months ago
• biomed-AI / Hist2ST
  ☆37Updated 2 years ago
• almaan / her2st
  Her2 Breast Cancer Project
  ☆67Updated 2 years ago
• maxpmx / HisToGene
  PyTorch implementation of HisToGene
  ☆35Updated 3 years ago
• daviddaiweizhang / istar
  ☆120Updated 3 months ago
• gevaertlab / sequoia-pub
  SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
  ☆32Updated this week
• Flashiness / METI
  Morphology-Enhanced Spatial Transcriptome Analysis Integrator
  ☆23Updated last week
• kmboehm / onco-fusion
  ☆27Updated 2 years ago
• BodenmillerGroup / SCPathology_publication
  The Single-Cell Pathology Landscape of Breast Cancer
  ☆25Updated 5 years ago
• bowang-lab / BLEEP
  Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning
  ☆72Updated 5 months ago
• zonechen1994 / AI_TLS_segmentation
  ☆24Updated last month
• GlastonburyC / RNAPath
  Self-supervised representation learning combining GTEx histology, RNA-seq and WGS
  ☆29Updated last week
• chenhcs / SCS
  Sub-cellular spatial transcriptomics Cell Segmentation
  ☆62Updated last year
• tcmyxc / kfb2svs
  kfb转svs小软件
  ☆15Updated 2 years ago
• jianhuupenn / TESLA
  Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA
  ☆53Updated last year
• Weiqin-Zhao / Hist2Cell
  ☆12Updated 6 months ago
• mahmoodlab / MAPS
  Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
  ☆50Updated last year
• tmonjo / DeepSpaCE
  ☆21Updated 2 years ago
• CharlieCheckpt / pacpaint
  ☆11Updated last year
• gevaertlab / GBM360
  Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications
  ☆21Updated last year
• sdw95927 / Ceograph
  CEll spatial Organization-based graph convolutional network
  ☆24Updated last year
• SydneyBioX / GHIST
  ☆9Updated this week
• msk-mind / luna
  Scripts for data processing
  ☆42Updated 9 months ago
• Patchouli-M / SequencingCancerFinder
  ☆32Updated last year
• ludvb / xfuse
  Super-resolved spatial transcriptomics by deep data fusion
  ☆72Updated last year
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆31Updated 2 weeks ago
• owkin / HE2RNA_code
  Train a model to predict gene expression from histology slides.
  ☆96Updated 2 years ago
• maximemeylan / Meylan_et_al_2022
  ☆18Updated 3 years ago