karel-brinda / smblLinks
SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.
☆23Updated 8 years ago
Alternatives and similar repositories for smbl
Users that are interested in smbl are comparing it to the libraries listed below
Sorting:
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 9 months ago
- ☆36Updated 5 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- blast, shmlast☆21Updated 4 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 4 years ago
- Response to blog post about Salmon☆37Updated 8 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- reference free variant assembly☆34Updated 2 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 9 months ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- sort genomic data☆36Updated 5 years ago
- A method to identify structural variation from sequencing data in target regions