Alternatives and similar repositories for cytoscape-tutorials

Users that are interested in cytoscape-tutorials are comparing it to the libraries listed below

• cytoscape / cytoscape-automation
  Collection of scripts that include programmatic io and control of Cytoscape
  ☆88Updated 8 months ago
• burkesquires / python_biologist
  Python Programming for Biologists
  ☆140Updated 3 weeks ago
• obophenotype / cell-ontology
  An ontology of cell types
  ☆182Updated this week
• ncbi / dbsnp
  dbSNP
  ☆141Updated last year
• YuLab-SMU / DOSE
  Disease Ontology Semantic and Enrichment analysis
  ☆122Updated 3 weeks ago
• bioFAM / MOFA2
  Multi-Omics Factor Analysis
  ☆355Updated last year
• guma44 / GEOparse
  Python library to access Gene Expression Omnibus Database (GEO)
  ☆155Updated last year
• seandavi / awesome-cancer-variant-resources
  A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
  ☆318Updated 7 months ago
• tiagoantao / biopython-notebook
  Notebooks to introduce biopython
  ☆140Updated 4 years ago
• cytoscape / cytoscape
  Cytoscape: an open source platform for network analysis and visualization
  ☆657Updated 3 weeks ago
• churchmanlab / genewalk
  GeneWalk identifies relevant gene functions for a biological context using network representation learning
  ☆132Updated last year
• bioFAM / MOFA
  Multi-Omics Factor Analysis
  ☆251Updated 5 years ago
• saezlab / pypath
  Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…
  ☆152Updated this week
• PacktPublishing / Bioinformatics-with-Python-Cookbook-Second-Edition
  Bioinformatics with Python Cookbook Second Edition, published by Packt
  ☆315Updated 4 years ago
• MaayanLab / clustergrammer
  An interactive heatmap visualization built using D3.js
  ☆235Updated 2 years ago
• gladstone-institutes / Bioinformatics-Workshops
  Workshops presented by the Gladstone Bioinformatics Core
  ☆237Updated 3 weeks ago
• BioinformaticsFMRP / TCGAbiolinks
  TCGAbiolinks
  ☆333Updated 2 weeks ago
• nextflow-io / awesome-nextflow
  A curated list of nextflow based pipelines
  ☆607Updated 4 months ago
• ponnhide / pyCircos
  python Circos
  ☆366Updated last year
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆101Updated last month
• openbiox / awosome-bioinformatics
  A curated list of resources for learning bioinformatics.
  ☆494Updated 3 years ago
• bioSyntax / bioSyntax
  Syntax highlighting for computational biology
  ☆269Updated 2 years ago
• peterjc / biopython_workshop
  A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.
  ☆224Updated 5 years ago
• macarthur-lab / gene_lists
  List of gene lists for genomic analyses.
  ☆222Updated 3 years ago
• mortazavilab / PyWGCNA
  PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
  ☆271Updated 8 months ago
• Nealelab / UK_Biobank_GWAS
  Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release
  ☆374Updated 2 years ago
• biothings / mygene.info
  MyGene.info: A BioThings API for gene annotations
  ☆128Updated last month
• eweitz / ideogram
  Chromosome visualization for the web
  ☆307Updated 5 months ago
• scRNA-tools / scRNA-tools
  Table of software for the analysis of single-cell RNA-seq data.
  ☆331Updated this week
• GoekeLab / bioinformatics-workflows
  minimal example implementations for bioinformatics workflow managers
  ☆280Updated 3 years ago