Collection of modular Cytoscape tutorials for online presentation using reveal.js
☆336Oct 7, 2026Updated this week
Alternatives and similar repositories for cytoscape-tutorials
Users that are interested in cytoscape-tutorials are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cytoscape: an open source platform for network analysis and visualization☆731Sep 21, 2026Updated 3 weeks ago
- Collection of scripts that include programmatic io and control of Cytoscape☆93Jun 30, 2026Updated 3 months ago
- Core App: REST API module for Cytoscape☆31Jul 31, 2025Updated last year
- Out of date. Refer to https://blog.js.cytoscape.org/tutorials/☆38Jul 7, 2017Updated 9 years ago
- Network annotation visualization☆19Oct 4, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Aug 9, 2021Updated 5 years ago
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated last year
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- Cytoscape 3 API bundles.☆27Sep 21, 2026Updated 3 weeks ago
- The Cytoscape.js blog, using Github pages and Jekyll☆18Jul 29, 2025Updated last year
- conserved non-coding sequence☆18Feb 21, 2022Updated 4 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Multiscale embedded gene co-expression network analysis☆62Jan 9, 2024Updated 2 years ago
- This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.☆45Jun 7, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Single RNA-seq data analysis with R (Finland, May, 2019)☆233Aug 1, 2022Updated 4 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆46Jan 28, 2026Updated 8 months ago
- Python library for calling Cytoscape Automation via CyREST☆88Feb 3, 2026Updated 8 months ago
- ☆12Feb 16, 2026Updated 7 months ago
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆13Mar 21, 2023Updated 3 years ago
- Applied Statistics for High-Throughput Biology☆16Jul 16, 2026Updated 2 months ago
- ATAC-seq Quality Control☆27Jul 13, 2026Updated 3 months ago
- collection of notebooks with different cytoscape workflows☆51Mar 22, 2023Updated 3 years ago
- TCGAbiolinks☆355Oct 7, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆20Jun 21, 2019Updated 7 years ago
- ☆17Jul 1, 2022Updated 4 years ago
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Mar 29, 2019Updated 7 years ago
- Fostering open source collaboration with technical writers.☆10Aug 17, 2019Updated 7 years ago
- Workshops presented by the Gladstone Bioinformatics Core☆253Oct 6, 2026Updated last week
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆16Nov 22, 2022Updated 3 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆344Feb 10, 2026Updated 8 months ago
- MethyScan: A tool for methylation specific PCR primer design and evaluation☆16Aug 20, 2021Updated 5 years ago
- Python utilities for Cytoscape and Cytoscape.js☆176Feb 21, 2022Updated 4 years ago
- Reactome Pathway Analysis☆46Sep 26, 2026Updated 2 weeks ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- Cytoscape.js based network visualizer for Jupyter Notebook☆37Jan 4, 2023Updated 3 years ago
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆149Aug 3, 2026Updated 2 months ago