cytoscape / py2cytoscape
Python utilities for Cytoscape and Cytoscape.js
☆175Updated 3 years ago
Alternatives and similar repositories for py2cytoscape:
Users that are interested in py2cytoscape are comparing it to the libraries listed below
- Hive Plots in using Python & matplotlib!☆71Updated 6 years ago
- visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells☆78Updated last year
- A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.☆318Updated 6 years ago
- Jupyter lab widget for rendering graphs (networks)☆24Updated 2 years ago
- An embeddable webGL graph visualization library.☆136Updated 6 years ago
- Collection of scripts that include programmatic io and control of Cytoscape☆87Updated 2 months ago
- Cytoscape.js based network visualizer for Jupyter Notebook☆38Updated 2 years ago
- Core App: REST API module for Cytoscape☆30Updated last week
- CGAT-ruffus is a lightweight python module for running computational pipelines☆174Updated 3 years ago
- D3 JavaScript networkx Graphs in Python☆51Updated 7 years ago
- Pilot to work with dynamic visualization by using python☆59Updated 5 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆147Updated 5 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆126Updated 2 years ago
- ggplot2 syntax in python. Actually wrapper around Wickham's ggplot2 in R☆71Updated 3 years ago
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆115Updated 2 years ago
- Analyze Data with Pandas-based Networks. Documentation:☆289Updated last week
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 2 years ago
- A Cytoscape Jupyter widget☆271Updated last month
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 6 years ago
- OBO-formatted ontologies → networkx (Python 3)☆138Updated last month
- A minimalist tree plotting library using toyplot graphs☆176Updated last month
- Draw interactive NetworkX graphs with Altair☆224Updated last year
- cyREST examples for Python users.☆11Updated 7 years ago
- Tutorials on Python Data Containers for no-so-BigData☆20Updated 8 years ago
- Bioinformatics in Python☆58Updated 10 months ago
- A Python frontend to (Open Biomedical) Ontologies.☆236Updated last month
- Draw NetworkX graphs using pydot/graphviz, with support for IPython notebooks.☆118Updated 5 years ago
- An interactive heatmap visualization built using D3.js☆233Updated 2 years ago
- Python client for the lightning API☆166Updated 7 years ago
- ☆39Updated 9 years ago